Detailed information NTG1108411

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: ACN079_RS07450
• Genome accession: NZ_CP184478
• Coordinates: 1656318..1657382 (+)
• Length: 354 a.a.
• NCBI ID: WP_420234174.1
• Uniprot ID: -
• Organism: Pseudomonas sp. ABY48
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1651318..1662382

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACN079_RS07435 (ACN079_07435)	-	1651465..1651986 (-)	522	WP_042732949.1	DUF2059 domain-containing protein	-
ACN079_RS07440 (ACN079_07440)	-	1652178..1653572 (+)	1395	WP_420234173.1	class II fumarate hydratase	-
ACN079_RS07445 (ACN079_07445)	-	1653667..1656111 (-)	2445	WP_420235559.1	penicillin-binding protein 1A	-
ACN079_RS07450 (ACN079_07450)	comM	1656318..1657382 (+)	1065	WP_420234174.1	pilus assembly protein PilM	Machinery gene
ACN079_RS07455 (ACN079_07455)	-	1657382..1657948 (+)	567	WP_420234175.1	PilN domain-containing protein	-
ACN079_RS07460 (ACN079_07460)	pilO	1657945..1658568 (+)	624	WP_420234176.1	type 4a pilus biogenesis protein PilO	-
ACN079_RS07465 (ACN079_07465)	-	1658565..1659110 (+)	546	WP_420234177.1	pilus assembly protein PilP	-
ACN079_RS07470 (ACN079_07470)	pilQ	1659107..1661194 (+)	2088	WP_420234178.1	type IV pilus secretin PilQ	Machinery gene
ACN079_RS07475 (ACN079_07475)	aroK	1661199..1661717 (+)	519	WP_003196983.1	shikimate kinase AroK	-

Sequence

Protein

• Length: 354 a.a.
• Molecular weight: 38152.76 Da
• Isoelectric Point: 4.9112

>NTDB_id=1108411 ACN079_RS07450 WP_420234174.1 1656318..1657382(+) (comM) [Pseudomonas sp. ABY48]
MLRLFNKKAHALLGIDISSTSVKLLELSRQGERYRVESYAVEPLPVNAVVEKNIAELEGVGQALSRLLAKARTPLRSVAV
AVAGSAVITKTIEMDAGLSDDDMENQLKIEADQYIPYPLDEVAIDFEVMGVSPRSNERVEVLLAACRKENVEVREAALAL
AGLTARVVDVEAYALERAFGLLATQLAASQERLTVAVVDIGATMTTLSVLHNGRIIYTREQLFGGRQLTEEIQRRYGLTP
EQAGLAKKQGGLPDDYLGEVLQPFREALVQQVSRSLQFFFASGQYSAVDHILLAGGTASVAGLDRLIEQRLGTPTQVANP
FTNMALSSKVNAGALAGDAPALMIACGLALRSFD

Nucleotide

• Length: 1065 bp

>NTDB_id=1108411 ACN079_RS07450 WP_420234174.1 1656318..1657382(+) (comM) [Pseudomonas sp. ABY48]
GTGCTACGACTCTTCAATAAAAAAGCCCATGCGCTTCTGGGGATCGACATCAGTTCGACGTCGGTGAAGCTGCTGGAGTT
GAGCCGCCAGGGCGAGCGATACCGCGTCGAGTCCTACGCGGTCGAACCGCTGCCAGTCAACGCCGTGGTCGAGAAGAACA
TCGCCGAGCTCGAAGGGGTGGGCCAGGCGTTGTCGCGGCTGTTGGCCAAGGCCAGGACGCCCTTGCGTAGCGTGGCGGTG
GCTGTGGCGGGTTCGGCGGTGATCACCAAGACCATCGAGATGGACGCCGGGCTGTCCGACGATGACATGGAAAACCAGCT
CAAGATCGAGGCCGATCAGTACATCCCTTATCCCTTGGATGAGGTGGCCATTGATTTCGAAGTGATGGGTGTTTCGCCCC
GCAGTAACGAGCGCGTCGAAGTGCTGCTGGCGGCGTGCCGCAAGGAAAACGTCGAGGTCCGCGAGGCCGCCTTGGCGCTC
GCCGGGCTGACGGCCAGGGTGGTCGATGTGGAGGCTTATGCGTTGGAGCGAGCTTTTGGCCTGCTCGCCACGCAACTGGC
CGCGTCCCAGGAACGGCTGACGGTGGCAGTTGTCGATATCGGCGCCACCATGACCACCCTCAGCGTGCTCCACAACGGGC
GCATCATCTATACCCGCGAACAGTTGTTCGGCGGCCGCCAGCTGACCGAGGAAATTCAACGCCGTTATGGCCTGACTCCC
GAGCAGGCCGGCCTGGCAAAGAAGCAGGGTGGCCTGCCGGACGATTATCTCGGCGAAGTACTGCAGCCTTTTCGCGAGGC
CCTGGTACAGCAGGTCTCGCGGTCCCTGCAGTTCTTCTTCGCCTCGGGCCAGTACAGCGCGGTGGACCACATTCTGCTCG
CCGGAGGCACGGCTTCGGTCGCCGGCCTGGATCGGCTGATCGAGCAGCGCCTGGGCACGCCGACCCAGGTGGCCAACCCG
TTTACCAATATGGCCCTGAGCAGCAAGGTCAATGCCGGTGCCCTGGCCGGTGATGCGCCGGCACTGATGATTGCCTGTGG
GCTGGCCCTCAGGAGTTTCGACTGA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-353)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Acinetobacter nosocomialis M2	55.932	100	0.559
pilM	Acinetobacter baumannii D1279779	55.932	100	0.559
comM	Acinetobacter baylyi ADP1	54.802	100	0.548
pilM	Legionella pneumophila strain ERS1305867	46.893	100	0.469