Detailed information
Bioinformatically predicted
Overview
| Name | ruvA | Type | Machinery gene |
| Locus tag | ID09_RS00280 | Genome accession | NZ_CP008921 |
| Coordinates | 47229..47819 (+) | Length | 196 a.a. |
| NCBI ID | WP_011921679.1 | Uniprot ID | A0A0H3N1H3 |
| Organism | Streptococcus suis 6407 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 42229..52819
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ID09_RS00270 (ID09_00290) | - | 43621..45144 (+) | 1524 | WP_024390804.1 | quinol oxidase | - |
| ID09_RS00275 (ID09_00295) | hexB | 45253..47190 (+) | 1938 | WP_024381980.1 | DNA mismatch repair endonuclease MutL | Machinery gene |
| ID09_RS00280 (ID09_00300) | ruvA | 47229..47819 (+) | 591 | WP_011921679.1 | Holliday junction branch migration protein RuvA | Machinery gene |
| ID09_RS00285 (ID09_00305) | - | 47978..48538 (+) | 561 | WP_024381979.1 | DNA-3-methyladenine glycosylase I | - |
| ID09_RS00290 (ID09_00310) | - | 48612..49022 (+) | 411 | WP_024381978.1 | helix-turn-helix transcriptional regulator | - |
| ID09_RS11320 (ID09_00315) | - | 48995..49660 (+) | 666 | WP_024381977.1 | CPBP family intramembrane glutamic endopeptidase | - |
| ID09_RS00300 (ID09_00320) | cinA | 49805..50986 (+) | 1182 | WP_024381976.1 | competence/damage-inducible protein A | Machinery gene |
| ID09_RS00305 (ID09_00325) | recA | 51038..52189 (+) | 1152 | WP_011922545.1 | recombinase RecA | Machinery gene |
Sequence
Protein
Download Length: 196 a.a. Molecular weight: 21739.10 Da Isoelectric Point: 5.0800
>NTDB_id=110812 ID09_RS00280 WP_011921679.1 47229..47819(+) (ruvA) [Streptococcus suis 6407]
MYDYIKGILTKITAKYIVVETQGVGYILQVANPYAYSGQVQQEVTVYTHQVIREDAHLLYGFATENEKSVFLSLISVSGI
GPTTALAIIAVDDNDGLVRAIEQKNITYLTKFPKIGKKTAQQMILDLEGKFVMSEEAGPVQQVAPSSENIALEEAMEAME
ALGYRPAELKKIKKFFEGTNDTAENYIKSALKMLMK
MYDYIKGILTKITAKYIVVETQGVGYILQVANPYAYSGQVQQEVTVYTHQVIREDAHLLYGFATENEKSVFLSLISVSGI
GPTTALAIIAVDDNDGLVRAIEQKNITYLTKFPKIGKKTAQQMILDLEGKFVMSEEAGPVQQVAPSSENIALEEAMEAME
ALGYRPAELKKIKKFFEGTNDTAENYIKSALKMLMK
Nucleotide
Download Length: 591 bp
>NTDB_id=110812 ID09_RS00280 WP_011921679.1 47229..47819(+) (ruvA) [Streptococcus suis 6407]
ATGTACGACTATATTAAAGGAATTTTAACGAAAATAACTGCAAAATATATTGTGGTAGAAACGCAAGGAGTAGGCTATAT
CTTGCAGGTTGCTAATCCCTACGCCTATTCAGGACAAGTCCAGCAAGAAGTGACTGTCTATACTCATCAAGTGATTCGAG
AAGATGCTCATTTGCTCTATGGATTTGCTACAGAAAATGAAAAATCCGTCTTTCTGAGTCTGATTTCAGTATCAGGTATT
GGTCCAACAACGGCTCTGGCTATTATTGCTGTTGATGATAATGATGGACTTGTTCGTGCTATTGAGCAGAAGAACATTAC
CTACCTGACCAAGTTTCCAAAGATTGGCAAGAAAACAGCCCAGCAGATGATTTTGGACCTGGAAGGCAAGTTTGTCATGA
GCGAAGAAGCGGGTCCTGTTCAACAAGTAGCACCATCCAGTGAAAATATCGCCCTCGAAGAAGCCATGGAAGCCATGGAA
GCTCTTGGCTACCGACCAGCCGAACTCAAGAAAATCAAGAAATTCTTTGAAGGCACCAACGACACCGCAGAAAACTACAT
CAAGTCAGCCCTTAAAATGCTGATGAAGTAA
ATGTACGACTATATTAAAGGAATTTTAACGAAAATAACTGCAAAATATATTGTGGTAGAAACGCAAGGAGTAGGCTATAT
CTTGCAGGTTGCTAATCCCTACGCCTATTCAGGACAAGTCCAGCAAGAAGTGACTGTCTATACTCATCAAGTGATTCGAG
AAGATGCTCATTTGCTCTATGGATTTGCTACAGAAAATGAAAAATCCGTCTTTCTGAGTCTGATTTCAGTATCAGGTATT
GGTCCAACAACGGCTCTGGCTATTATTGCTGTTGATGATAATGATGGACTTGTTCGTGCTATTGAGCAGAAGAACATTAC
CTACCTGACCAAGTTTCCAAAGATTGGCAAGAAAACAGCCCAGCAGATGATTTTGGACCTGGAAGGCAAGTTTGTCATGA
GCGAAGAAGCGGGTCCTGTTCAACAAGTAGCACCATCCAGTGAAAATATCGCCCTCGAAGAAGCCATGGAAGCCATGGAA
GCTCTTGGCTACCGACCAGCCGAACTCAAGAAAATCAAGAAATTCTTTGAAGGCACCAACGACACCGCAGAAAACTACAT
CAAGTCAGCCCTTAAAATGCTGATGAAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ruvA | Streptococcus pneumoniae R6 |
76.142 |
100 |
0.765 |
| ruvA | Streptococcus pneumoniae D39 |
76.142 |
100 |
0.765 |
| ruvA | Streptococcus pneumoniae TIGR4 |
76.142 |
100 |
0.765 |
| ruvA | Bacillus subtilis subsp. subtilis str. 168 |
39.409 |
100 |
0.408 |