Detailed information NTG0110505

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: ACAK33_RS06405
• Genome accession: NZ_AP031588
• Coordinates: 1326865..1327923 (+)
• Length: 352 a.a.
• NCBI ID: WP_005115308.1
• Uniprot ID: -
• Organism: Acinetobacter baumannii strain JUNP712
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1321865..1332923

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACAK33_RS06390 (JUNP712_1268)	-	1322971..1323303 (+)	333	WP_000169598.1	hypothetical protein	-
ACAK33_RS06395 (JUNP712_1269)	-	1323306..1324130 (+)	825	WP_001990541.1	putative RNA methyltransferase	-
ACAK33_RS06400 (JUNP712_1270)	ponA	1324148..1326703 (-)	2556	WP_000736662.1	penicillin-binding protein PBP1a	-
ACAK33_RS06405 (JUNP712_1271)	pilM	1326865..1327923 (+)	1059	WP_005115308.1	pilus assembly protein PilM	Machinery gene
ACAK33_RS06410 (JUNP712_1272)	pilN	1327923..1328564 (+)	642	WP_000201229.1	PilN domain-containing protein	Machinery gene
ACAK33_RS06415 (JUNP712_1273)	pilO	1328561..1329301 (+)	741	WP_000076101.1	type 4a pilus biogenesis protein PilO	Machinery gene
ACAK33_RS06420 (JUNP712_1274)	pilP	1329312..1329839 (+)	528	WP_000695059.1	pilus assembly protein PilP	Machinery gene
ACAK33_RS06425 (JUNP712_1275)	pilQ	1329902..1332067 (+)	2166	WP_001017040.1	type IV pilus secretin PilQ family protein	Machinery gene
ACAK33_RS06430 (JUNP712_1276)	aroK	1332079..1332648 (+)	570	WP_000643712.1	shikimate kinase AroK	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 39092.69 Da
• Isoelectric Point: 4.4618

>NTDB_id=110505 ACAK33_RS06405 WP_005115308.1 1326865..1327923(+) (pilM) [Acinetobacter baumannii strain JUNP712]
MLRLYRKPNKGLMGVDISSTSVKLLELSVKNGKYWVESYALMPLPENSVVEKNILNPEAVAEALERAMNLANPQTTHAAI
AVPTSTVIHKTIEMDADMSDDEREVQIRVDAEQYIPFPLDEVSLDFEVLPDRLANPNRVNVLLVATRTENVETRVEVLEL
ADLNPKLADVESYAVERAFSVFADSLPMGANTIGILDIGHTMTTLSVMQNGKIIYTREQVFGGKQLTLEIQSRYGLSLEE
ASRAKKDRSLPDDYEIEVLDPFLDAVVQQAARSLQFFFFSSQFNEIDHILLAGGNANIPGLAKLLQQKLGYRVTIANPFL
QMGFSPQVDVQKIENDASSLMVACGLALRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=110505 ACAK33_RS06405 WP_005115308.1 1326865..1327923(+) (pilM) [Acinetobacter baumannii strain JUNP712]
GTGCTCAGGTTATATCGTAAACCTAATAAGGGGTTAATGGGTGTCGATATTAGTTCGACTTCTGTTAAGTTGTTAGAGCT
CTCTGTCAAGAACGGTAAATATTGGGTAGAAAGCTATGCTTTGATGCCTTTACCCGAAAACAGTGTAGTTGAAAAAAATA
TCTTAAATCCAGAAGCAGTTGCAGAGGCTTTGGAACGGGCGATGAATTTAGCAAATCCCCAAACCACTCATGCTGCAATT
GCTGTTCCGACATCGACGGTTATTCATAAAACTATCGAAATGGATGCAGATATGAGCGATGACGAACGCGAAGTTCAGAT
TCGTGTAGATGCGGAGCAGTATATACCGTTCCCTTTAGATGAGGTGAGCCTTGATTTTGAGGTTTTGCCGGATCGTCTTG
CGAATCCAAATCGTGTAAATGTGCTCTTGGTCGCCACAAGAACAGAAAACGTTGAAACACGCGTTGAAGTGCTTGAATTG
GCAGATTTAAATCCTAAATTGGCTGATGTCGAAAGTTACGCGGTTGAGCGCGCTTTTAGCGTGTTTGCTGATAGCTTACC
GATGGGTGCAAATACCATAGGGATTTTAGATATCGGTCATACCATGACGACATTATCTGTCATGCAAAATGGCAAGATTA
TTTATACACGAGAGCAGGTTTTCGGCGGAAAACAACTTACGCTTGAAATTCAAAGTCGTTATGGTTTGTCTTTAGAAGAA
GCAAGCCGAGCAAAAAAAGATCGCTCTTTACCAGATGATTATGAAATTGAAGTGCTAGACCCATTTCTAGATGCGGTAGT
TCAGCAGGCGGCCCGTTCACTACAATTTTTCTTTTTTTCATCCCAATTTAACGAAATAGACCATATTTTGCTCGCTGGTG
GAAATGCGAATATTCCAGGCCTTGCTAAGCTTTTGCAGCAAAAATTGGGCTACCGTGTCACGATTGCCAACCCGTTTTTA
CAAATGGGCTTTTCTCCTCAAGTCGATGTTCAAAAAATTGAAAATGATGCTTCATCTTTAATGGTGGCATGTGGCTTGGC
TTTAAGGAGTTTTGATTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-351)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	99.716	100	0.997
comM	Acinetobacter nosocomialis M2	98.864	100	0.989
comM	Acinetobacter baylyi ADP1	81.25	100	0.813
pilM	Legionella pneumophila strain ERS1305867	41.808	100	0.42