Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | ACNSOB_RS23760 | Genome accession | NZ_CP183064 |
| Coordinates | 4853646..4854173 (-) | Length | 175 a.a. |
| NCBI ID | WP_016155359.1 | Uniprot ID | A0AAE2J7N6 |
| Organism | Citrobacter braakii strain FAHZZU5618 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 4848646..4859173
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACNSOB_RS23740 (ACNSOB_23705) | soxR | 4850289..4850747 (-) | 459 | WP_016155363.1 | redox-sensitive transcriptional activator SoxR | - |
| ACNSOB_RS23745 (ACNSOB_23710) | soxS | 4850834..4851157 (+) | 324 | WP_016155362.1 | superoxide response transcriptional regulator SoxS | - |
| ACNSOB_RS23750 (ACNSOB_23715) | - | 4851160..4852746 (-) | 1587 | WP_016155448.1 | EAL domain-containing protein | - |
| ACNSOB_RS23755 (ACNSOB_23720) | - | 4853298..4853579 (+) | 282 | WP_016155360.1 | YjcB family protein | - |
| ACNSOB_RS23760 (ACNSOB_23725) | ssb | 4853646..4854173 (-) | 528 | WP_016155359.1 | single-stranded DNA-binding protein SSB1 | Machinery gene |
| ACNSOB_RS23765 (ACNSOB_23730) | uvrA | 4854425..4857247 (+) | 2823 | WP_016155358.1 | excinuclease ABC subunit UvrA | - |
| ACNSOB_RS23770 (ACNSOB_23735) | - | 4857342..4857698 (-) | 357 | WP_016155357.1 | MmcQ/YjbR family DNA-binding protein | - |
| ACNSOB_RS23775 (ACNSOB_23740) | aphA | 4857825..4858538 (-) | 714 | WP_003826615.1 | acid phosphatase AphA | - |
Sequence
Protein
Download Length: 175 a.a. Molecular weight: 18749.79 Da Isoelectric Point: 5.2456
>NTDB_id=1103945 ACNSOB_RS23760 WP_016155359.1 4853646..4854173(-) (ssb) [Citrobacter braakii strain FAHZZU5618]
MASRGVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKATGEMKEQTEWHRVVLFGKLAEVASEYLRKGSQVYI
EGQLRTRKWTDQSGVEKYTTEVVVNVGGTMQMLGGRQGGGAPAGGGQQQGGWGQPQQPQGGNQFSGGAQSRPQQQSAPAA
PSNEPPMDFDDDIPF
MASRGVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKATGEMKEQTEWHRVVLFGKLAEVASEYLRKGSQVYI
EGQLRTRKWTDQSGVEKYTTEVVVNVGGTMQMLGGRQGGGAPAGGGQQQGGWGQPQQPQGGNQFSGGAQSRPQQQSAPAA
PSNEPPMDFDDDIPF
Nucleotide
Download Length: 528 bp
>NTDB_id=1103945 ACNSOB_RS23760 WP_016155359.1 4853646..4854173(-) (ssb) [Citrobacter braakii strain FAHZZU5618]
ATGGCCAGCAGAGGCGTAAACAAGGTGATTCTCGTCGGTAATCTGGGCCAGGACCCGGAAGTACGCTATATGCCGAATGG
TGGCGCAGTTGCCAACATTACGCTGGCTACTTCCGAATCCTGGCGTGATAAAGCGACCGGCGAAATGAAAGAGCAGACTG
AATGGCACCGTGTGGTGCTGTTCGGCAAACTGGCGGAAGTTGCCAGCGAATATCTGCGTAAAGGTTCCCAGGTCTATATC
GAAGGTCAGCTGCGTACCCGCAAATGGACCGATCAATCCGGCGTAGAAAAGTACACCACTGAAGTTGTGGTTAACGTTGG
CGGCACCATGCAAATGCTGGGCGGTCGTCAGGGTGGTGGGGCTCCGGCAGGTGGCGGCCAGCAGCAGGGTGGTTGGGGTC
AGCCTCAGCAGCCGCAAGGTGGCAATCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCAGCAGCAGTCGGCTCCGGCAGCG
CCGTCTAATGAGCCGCCGATGGATTTCGACGACGATATTCCGTTCTAA
ATGGCCAGCAGAGGCGTAAACAAGGTGATTCTCGTCGGTAATCTGGGCCAGGACCCGGAAGTACGCTATATGCCGAATGG
TGGCGCAGTTGCCAACATTACGCTGGCTACTTCCGAATCCTGGCGTGATAAAGCGACCGGCGAAATGAAAGAGCAGACTG
AATGGCACCGTGTGGTGCTGTTCGGCAAACTGGCGGAAGTTGCCAGCGAATATCTGCGTAAAGGTTCCCAGGTCTATATC
GAAGGTCAGCTGCGTACCCGCAAATGGACCGATCAATCCGGCGTAGAAAAGTACACCACTGAAGTTGTGGTTAACGTTGG
CGGCACCATGCAAATGCTGGGCGGTCGTCAGGGTGGTGGGGCTCCGGCAGGTGGCGGCCAGCAGCAGGGTGGTTGGGGTC
AGCCTCAGCAGCCGCAAGGTGGCAATCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCAGCAGCAGTCGGCTCCGGCAGCG
CCGTCTAATGAGCCGCCGATGGATTTCGACGACGATATTCCGTTCTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Vibrio cholerae strain A1552 |
74.586 |
100 |
0.771 |
| ssb | Glaesserella parasuis strain SC1401 |
57.609 |
100 |
0.606 |
| ssb | Neisseria meningitidis MC58 |
48.333 |
100 |
0.497 |
| ssb | Neisseria gonorrhoeae MS11 |
48.333 |
100 |
0.497 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
36.111 |
100 |
0.371 |