Detailed information    

insolico Bioinformatically predicted

Overview


Name   dprA   Type   Machinery gene
Locus tag   ACAK31_RS17770 Genome accession   NZ_AP031581
Coordinates   3686508..3687638 (+) Length   376 a.a.
NCBI ID   WP_031949396.1    Uniprot ID   -
Organism   Acinetobacter baumannii strain JUNP496     
Function   ssDNA binding; loading RecA onto ssDNA (predicted from homology)   
DNA processing

Genomic Context


Location: 3681508..3692638
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACAK31_RS17745 (JUNP496_3561) - 3681768..3681974 (-) 207 WP_000182542.1 hypothetical protein -
  ACAK31_RS17750 (JUNP496_3562) - 3682028..3684142 (-) 2115 WP_001120680.1 TonB-dependent copper receptor -
  ACAK31_RS17755 (JUNP496_3563) - 3684215..3684643 (-) 429 WP_000231981.1 DUF2946 family protein -
  ACAK31_RS17760 (JUNP496_3564) def 3684680..3685210 (-) 531 WP_001196539.1 peptide deformylase -
  ACAK31_RS17765 (JUNP496_3565) tsaP 3685333..3686487 (+) 1155 WP_000755270.1 LysM peptidoglycan-binding domain-containing protein Machinery gene
  ACAK31_RS17770 (JUNP496_3566) dprA 3686508..3687638 (+) 1131 WP_031949396.1 DNA-processing protein DprA Machinery gene
  ACAK31_RS17775 (JUNP496_3567) - 3687689..3688258 (+) 570 WP_000633612.1 L-threonylcarbamoyladenylate synthase -
  ACAK31_RS17780 (JUNP496_3568) - 3688650..3689570 (-) 921 WP_000084546.1 DMT family transporter -
  ACAK31_RS17785 (JUNP496_3569) - 3689676..3690326 (-) 651 WP_096877400.1 TetR/AcrR family transcriptional regulator -
  ACAK31_RS17790 (JUNP496_3570) - 3690463..3691677 (+) 1215 WP_000372838.1 MFS transporter -
  ACAK31_RS17795 (JUNP496_3571) - 3691699..3692463 (+) 765 WP_000786955.1 AraC family transcriptional regulator -

Sequence


Protein


Download         Length: 376 a.a.        Molecular weight: 41930.43 Da        Isoelectric Point: 6.5418

>NTDB_id=110340 ACAK31_RS17770 WP_031949396.1 3686508..3687638(+) (dprA) [Acinetobacter baumannii strain JUNP496]
MLTQLSSHHYHTLKVWYLVQHSLVSFKKIIDYFGNCEKATQPDGLTKWSSLGLHANHLKRVNEFQTPQGQAQFEQLVQQV
RQHTDFILTADDSGYPSQLLPYTDYPPIIFGKGQAQALLQPQIAIVGSRKPSPHGRQVAYDFAYYLSEKGFFISSGLAYG
IDEAAHQGASTHQRTIAVTGTGLDTTYPAQNKKLAEHILAQNGAIITEFLPGTPPLQQHFPRRNRIVSGLSLGVLVVEAT
LKSGSLITANKAAEQGKTVFAIPGHIYSEFHQGCHQLIREGAILIDHPEQIIEDLALPTQWQSQQQNQTEEANTNTPEIP
EHLIDLYQSLDWVGQNIDQLVVHHNIPVSELTSSLMELELLGLCMQQSGLYLRCRS

Nucleotide


Download         Length: 1131 bp        

>NTDB_id=110340 ACAK31_RS17770 WP_031949396.1 3686508..3687638(+) (dprA) [Acinetobacter baumannii strain JUNP496]
ATGCTCACTCAACTTTCTTCACACCACTACCACACACTTAAAGTGTGGTATTTGGTGCAGCATTCTTTAGTCAGCTTTAA
AAAAATTATTGATTATTTTGGAAATTGTGAAAAAGCCACTCAACCTGATGGTTTAACAAAGTGGTCCTCTCTGGGGCTAC
ATGCTAATCACTTAAAGCGTGTAAACGAATTTCAAACGCCCCAAGGTCAGGCGCAGTTTGAACAACTTGTACAACAAGTT
CGTCAGCATACGGATTTTATTTTAACGGCAGATGACTCAGGCTACCCCTCTCAATTACTTCCTTATACAGATTATCCACC
TATTATTTTTGGGAAAGGTCAAGCACAAGCTTTATTGCAACCTCAGATTGCGATTGTCGGTAGCCGAAAACCAAGCCCAC
ATGGACGACAGGTCGCTTATGATTTTGCTTACTACTTAAGTGAAAAGGGCTTTTTCATTAGTAGTGGTCTGGCTTATGGC
ATTGATGAAGCCGCTCATCAAGGTGCATCTACTCATCAACGTACCATTGCAGTGACGGGTACGGGCTTAGACACTACTTA
TCCAGCTCAAAATAAAAAACTTGCAGAACATATTTTGGCTCAAAACGGCGCCATTATTACTGAGTTTTTACCGGGTACAC
CGCCATTACAACAGCATTTTCCACGTAGAAACCGAATTGTCAGCGGTTTGAGTTTAGGCGTTTTGGTGGTAGAAGCGACA
TTAAAAAGTGGCTCACTCATCACGGCCAATAAAGCTGCTGAACAAGGTAAAACCGTATTTGCGATTCCGGGCCATATTTA
TAGCGAGTTTCATCAAGGATGCCATCAACTTATCCGTGAAGGTGCAATTTTAATCGACCATCCTGAACAGATTATTGAGG
ATCTTGCTTTACCCACTCAATGGCAAAGTCAGCAACAAAATCAAACTGAAGAAGCTAATACGAATACTCCAGAAATTCCT
GAGCATTTGATTGACCTTTATCAGTCTTTAGACTGGGTGGGACAAAATATTGACCAACTTGTAGTTCACCATAATATTCC
AGTTTCTGAACTGACCTCTTCACTAATGGAACTAGAACTACTCGGTTTATGTATGCAACAATCAGGGCTGTATTTACGTT
GTCGTTCTTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dprA Acinetobacter baumannii strain A118

98.138

100

0.981

  dprA Acinetobacter baumannii D1279779

97.872

100

0.979

  dprA Acinetobacter baylyi ADP1

70.604

100

0.715

  dprA Vibrio cholerae strain A1552

42.9

88.032

0.378


Multiple sequence alignment