Detailed information
Bioinformatically predicted
Overview
| Name | Cj0011c | Type | Machinery gene |
| Locus tag | ACNI3C_RS11560 | Genome accession | NZ_CP182357 |
| Coordinates | 2327074..2327319 (+) | Length | 81 a.a. |
| NCBI ID | WP_419769958.1 | Uniprot ID | - |
| Organism | MAG: Candidatus Marinarcus sp. isolate PCE-1 | ||
| Function | DNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2322074..2332319
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACNI3C_RS11535 (ACNI3C_11535) | - | 2322594..2323037 (-) | 444 | WP_419769953.1 | protein tyrosine phosphatase family protein | - |
| ACNI3C_RS11540 (ACNI3C_11540) | - | 2323047..2324309 (-) | 1263 | WP_419769954.1 | DEAD/DEAH box helicase | - |
| ACNI3C_RS11545 (ACNI3C_11545) | - | 2324315..2326144 (-) | 1830 | WP_419769955.1 | ABC-F family ATP-binding cassette domain-containing protein | - |
| ACNI3C_RS11550 (ACNI3C_11550) | - | 2326210..2326623 (-) | 414 | WP_419769956.1 | hypothetical protein | - |
| ACNI3C_RS11555 (ACNI3C_11555) | - | 2326677..2326907 (-) | 231 | WP_419769957.1 | hypothetical protein | - |
| ACNI3C_RS11560 (ACNI3C_11560) | Cj0011c | 2327074..2327319 (+) | 246 | WP_419769958.1 | ComEA family DNA-binding protein | Machinery gene |
| ACNI3C_RS11565 (ACNI3C_11565) | - | 2327343..2328647 (-) | 1305 | WP_419769959.1 | APC family permease | - |
| ACNI3C_RS11570 (ACNI3C_11570) | - | 2328657..2329403 (-) | 747 | WP_419769960.1 | STAS/SEC14 domain-containing protein | - |
| ACNI3C_RS11575 (ACNI3C_11575) | - | 2329546..2330025 (+) | 480 | WP_419769961.1 | YhcH/YjgK/YiaL family protein | - |
| ACNI3C_RS11580 (ACNI3C_11580) | - | 2330027..2330446 (-) | 420 | WP_419769962.1 | cupin domain-containing protein | - |
| ACNI3C_RS11585 (ACNI3C_11585) | - | 2330548..2330805 (+) | 258 | WP_419769963.1 | hypothetical protein | - |
| ACNI3C_RS11590 (ACNI3C_11590) | - | 2330941..2332017 (+) | 1077 | WP_419769964.1 | YeeE/YedE family protein | - |
Sequence
Protein
Download Length: 81 a.a. Molecular weight: 8802.49 Da Isoelectric Point: 9.2740
>NTDB_id=1101374 ACNI3C_RS11560 WP_419769958.1 2327074..2327319(+) (Cj0011c) [MAG: Candidatus Marinarcus sp. isolate PCE-1]
MKSLLCLIALSFSLFALDLNKATLDELTTLKGIGAVKAKSIIAYREANKCIKSLDDLLNIKGIGESFLTKNKNEISLSPC
K
MKSLLCLIALSFSLFALDLNKATLDELTTLKGIGAVKAKSIIAYREANKCIKSLDDLLNIKGIGESFLTKNKNEISLSPC
K
Nucleotide
Download Length: 246 bp
>NTDB_id=1101374 ACNI3C_RS11560 WP_419769958.1 2327074..2327319(+) (Cj0011c) [MAG: Candidatus Marinarcus sp. isolate PCE-1]
ATGAAAAGTCTATTGTGTTTAATTGCGTTAAGTTTTTCACTCTTTGCTTTAGATTTAAATAAAGCAACCTTAGATGAACT
GACAACCTTAAAAGGCATTGGTGCAGTAAAAGCAAAAAGTATTATTGCTTACAGAGAAGCCAATAAGTGTATAAAGTCTT
TGGATGATTTGCTCAATATCAAAGGCATTGGAGAGTCGTTTTTAACAAAAAACAAAAATGAGATCTCTCTTTCACCTTGC
AAATAA
ATGAAAAGTCTATTGTGTTTAATTGCGTTAAGTTTTTCACTCTTTGCTTTAGATTTAAATAAAGCAACCTTAGATGAACT
GACAACCTTAAAAGGCATTGGTGCAGTAAAAGCAAAAAGTATTATTGCTTACAGAGAAGCCAATAAGTGTATAAAGTCTT
TGGATGATTTGCTCAATATCAAAGGCATTGGAGAGTCGTTTTTAACAAAAAACAAAAATGAGATCTCTCTTTCACCTTGC
AAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| Cj0011c | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
50.617 |
100 |
0.506 |
| comE | Neisseria gonorrhoeae MS11 |
45.57 |
97.531 |
0.444 |
| comE | Neisseria gonorrhoeae MS11 |
45.57 |
97.531 |
0.444 |
| comE | Neisseria gonorrhoeae MS11 |
45.57 |
97.531 |
0.444 |
| comE | Neisseria gonorrhoeae MS11 |
45.57 |
97.531 |
0.444 |
| comEA | Vibrio cholerae C6706 |
46.154 |
80.247 |
0.37 |
| comEA | Vibrio cholerae strain A1552 |
46.154 |
80.247 |
0.37 |