Detailed information NTG0109938

Bioinformatically predicted

Overview

• Name: pilU
• Type: Machinery gene
• Locus tag: ACGHZ6_RS23720
• Genome accession: NZ_AP031498
• Coordinates: 5464081..5465223 (-)
• Length: 380 a.a.
• NCBI ID: WP_390616548.1
• Uniprot ID: -
• Organism: Maricurvus nonylphenolicus strain KU41E
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 5459081..5470223

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACGHZ6_RS23695 (R50073_47320)	gshB	5459813..5460781 (+)	969	WP_390616543.1	glutathione synthase	-
ACGHZ6_RS23700 (R50073_47330)	-	5460814..5461758 (+)	945	WP_390616544.1	energy transducer TonB	-
ACGHZ6_RS23705 (R50073_47340)	-	5461797..5462387 (+)	591	WP_390616545.1	YqgE/AlgH family protein	-
ACGHZ6_RS23710 (R50073_47350)	ruvX	5462406..5462819 (+)	414	WP_390616546.1	Holliday junction resolvase RuvX	-
ACGHZ6_RS23715 (R50073_47360)	-	5462773..5463912 (-)	1140	WP_390616547.1	PQQ-dependent sugar dehydrogenase	-
ACGHZ6_RS23720 (R50073_47370)	pilU	5464081..5465223 (-)	1143	WP_390616548.1	PilT/PilU family type 4a pilus ATPase	Machinery gene
ACGHZ6_RS23725 (R50073_47380)	pilT	5465239..5466273 (-)	1035	WP_390616549.1	type IV pilus twitching motility protein PilT	Machinery gene
ACGHZ6_RS23730 (R50073_47390)	-	5466398..5467099 (+)	702	WP_390616550.1	YggS family pyridoxal phosphate-dependent enzyme	-
ACGHZ6_RS23735 (R50073_47400)	proC	5467130..5467948 (+)	819	WP_390616552.1	pyrroline-5-carboxylate reductase	-
ACGHZ6_RS23740 (R50073_47410)	-	5467990..5468598 (+)	609	WP_390616553.1	YggT family protein	-

Sequence

Protein

• Length: 380 a.a.
• Molecular weight: 42313.46 Da
• Isoelectric Point: 5.7736

>NTDB_id=109938 ACGHZ6_RS23720 WP_390616548.1 5464081..5465223(-) (pilU) [Maricurvus nonylphenolicus strain KU41E]
MDFERLLSLMVEKGASDLFITAGVPPSMKLHGKVVPVTTTPLSPEKARETVLSVMNEKQRQEFLENKELNFAISARGIGR
FRTSAFYQRNLAGMVLRRIETNIPKIDDLGLPEVIKELAMTKRGLVIFVGATGTGKSTSLASMIGHRNRNSKGHIISIED
PIEFIHQHQGCIITQREVGIDTDSFEIALKNTLRQAPDVILIGEVRSRETMDHAIAFAETGHLCLCTLHANNANQALDRI
IHFFPPDRHSQLWMDLSLNLKGIVAQQLIPTPDGNGRRACLEVLLNTPLAADLIRKGEVADLKELMKKSTEVGMQTFDQA
LYDLYDRGEITYEDALSHADSANDLRLMIKLASETDADYLSHAADELSIQDDESDKPKLF

Nucleotide

• Length: 1143 bp

>NTDB_id=109938 ACGHZ6_RS23720 WP_390616548.1 5464081..5465223(-) (pilU) [Maricurvus nonylphenolicus strain KU41E]
ATGGATTTTGAACGTTTACTAAGCCTGATGGTTGAGAAGGGTGCTTCCGACCTGTTTATTACCGCTGGTGTACCGCCGTC
CATGAAACTGCACGGTAAAGTTGTGCCGGTTACCACCACACCGCTGTCGCCGGAAAAAGCGCGCGAGACGGTGTTGAGTG
TGATGAACGAAAAGCAGCGTCAGGAATTTCTGGAAAATAAAGAATTAAACTTTGCCATCAGTGCCCGCGGTATTGGCCGT
TTTCGGACCAGCGCATTTTATCAGCGCAACCTAGCGGGTATGGTGCTGCGTCGTATTGAAACCAATATTCCCAAGATTGA
TGACTTGGGTTTGCCGGAAGTGATTAAAGAACTGGCCATGACCAAACGTGGTCTGGTGATTTTTGTGGGTGCTACCGGTA
CCGGTAAGTCGACCTCGTTGGCGTCGATGATTGGACACCGCAACCGCAACTCCAAAGGCCACATCATTTCTATCGAAGAT
CCGATTGAATTTATTCACCAGCACCAGGGTTGCATCATTACCCAGCGCGAGGTGGGGATTGATACGGACTCTTTCGAGAT
CGCTCTGAAAAATACCCTGCGTCAGGCACCGGATGTGATTCTGATTGGTGAGGTGCGTTCACGGGAGACCATGGACCACG
CCATTGCCTTCGCAGAAACCGGTCACCTGTGTCTTTGTACTCTGCACGCCAACAACGCTAACCAGGCGCTGGATCGGATT
ATTCACTTCTTCCCACCGGATCGTCACTCGCAGTTGTGGATGGACTTGTCACTTAACCTGAAAGGCATTGTCGCTCAGCA
GTTGATTCCAACCCCGGACGGCAACGGCCGCCGTGCGTGTCTGGAGGTGTTGTTAAATACACCGCTGGCGGCAGACCTGA
TTCGTAAAGGTGAAGTGGCAGATCTGAAAGAGTTGATGAAAAAATCCACCGAAGTGGGGATGCAGACTTTCGATCAGGCG
TTGTACGATTTGTATGATCGCGGCGAGATCACCTATGAAGATGCCCTCTCCCATGCGGATTCTGCCAATGACCTGCGCTT
GATGATCAAGCTGGCTTCAGAGACGGATGCGGATTATCTATCTCATGCGGCTGATGAGTTGAGTATTCAGGACGACGAAA
GCGATAAGCCCAAACTGTTTTAG

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (37-269)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilU	Pseudomonas stutzeri DSM 10701	78.421	100	0.784
pilU	Acinetobacter baylyi ADP1	68.067	93.947	0.639
pilU	Vibrio cholerae strain A1552	56	92.105	0.516
pilT	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	44.838	89.211	0.4