Detailed information NTG1097453

Bioinformatically predicted

Overview

• Name: pilY2
• Type: Machinery gene
• Locus tag: ACM0O0_RS01660
• Genome accession: NZ_CP180689
• Coordinates: 347077..347559 (+)
• Length: 160 a.a.
• NCBI ID: WP_087089565.1
• Uniprot ID: -
• Organism: Acinetobacter lactucae isolate nanjing
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 342077..352559

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACM0O0_RS01650	pilX	342391..343200 (+)	810	WP_200043398.1	PilX N-terminal domain-containing pilus assembly protein	Machinery gene
ACM0O0_RS01655	pilY1	343212..347066 (+)	3855	WP_416040977.1	PilC/PilY family type IV pilus protein	Machinery gene
ACM0O0_RS01660	pilY2	347077..347559 (+)	483	WP_087089565.1	type IV pilin protein	Machinery gene
ACM0O0_RS01665	pilE	347556..347981 (+)	426	WP_087089564.1	type IV pilin protein	Machinery gene
ACM0O0_RS01670	rpsP	348129..348380 (+)	252	WP_000260334.1	30S ribosomal protein S16	-
ACM0O0_RS01675	rimM	348400..348948 (+)	549	WP_416040978.1	ribosome maturation factor RimM	-
ACM0O0_RS01680	trmD	348991..349746 (+)	756	WP_057105812.1	tRNA (guanosine(37)-N1)-methyltransferase TrmD	-
ACM0O0_RS01685	rplS	349966..350334 (+)	369	WP_002116654.1	50S ribosomal protein L19	-
ACM0O0_RS01690	-	350387..351328 (-)	942	WP_082183535.1	lipase family alpha/beta hydrolase	-
ACM0O0_RS01695	-	351444..352478 (-)	1035	WP_416040979.1	lipase secretion chaperone	-

Sequence

Protein

• Length: 160 a.a.
• Molecular weight: 17471.77 Da
• Isoelectric Point: 8.4721

>NTDB_id=1097453 ACM0O0_RS01660 WP_087089565.1 347077..347559(+) (pilY2) [Acinetobacter lactucae isolate nanjing]
MNKYYILRFNQGVTLIELMVVIVIVAIFASIAIPSYQSYSRRATASAAKGEILKLAEQLERHKSKNFTYRGFTTTSVTLP
RGGYTIEISDDTTTGNLLTNAAANGQTWVIKATTTDSRNINFIAKNSGLRCQSLTATAVDNDCGGAVTCNVCETNSENWQ

Nucleotide

• Length: 483 bp

>NTDB_id=1097453 ACM0O0_RS01660 WP_087089565.1 347077..347559(+) (pilY2) [Acinetobacter lactucae isolate nanjing]
ATGAATAAATACTATATTCTGCGGTTTAATCAGGGTGTTACCTTGATTGAGCTCATGGTTGTCATCGTGATTGTCGCTAT
TTTTGCTTCGATTGCTATCCCTTCATATCAAAGTTATAGCCGCAGAGCGACCGCCTCTGCTGCCAAAGGCGAAATTCTAA
AATTGGCGGAACAGTTGGAACGGCATAAATCCAAGAACTTTACCTATAGAGGATTTACCACCACATCTGTAACTTTGCCA
CGGGGTGGTTATACGATTGAAATTAGTGATGATACGACGACAGGAAATTTATTGACGAATGCTGCTGCAAATGGGCAAAC
ATGGGTCATTAAAGCGACAACTACAGATTCAAGAAACATTAATTTTATTGCTAAGAATTCAGGTTTGCGTTGCCAAAGTT
TAACAGCTACGGCTGTTGATAATGACTGTGGTGGAGCGGTCACTTGCAATGTATGTGAAACAAATAGTGAGAATTGGCAA
TGA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (10-32)

• Type IV minor pilin ComP, DNA uptake sequence receptor (ComP_DUS) (34-115)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilY2	Acinetobacter baumannii D1279779	93.75	100	0.938
comE	Acinetobacter baylyi ADP1	41.279	100	0.444