Detailed information NTG1097145

Bioinformatically predicted

Overview

• Name: comEC
• Type: Machinery gene
• Locus tag: ACL43R_RS02105
• Genome accession: NZ_CP180647
• Coordinates: 430698..432908 (+)
• Length: 736 a.a.
• NCBI ID: WP_416037664.1
• Uniprot ID: -
• Organism: Lactococcus formosensis strain JAL11
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 425698..437908

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACL43R_RS02090 (ACL43R_02090)	-	427083..428639 (+)	1557	WP_017368848.1	ABC-F family ATP-binding cassette domain-containing protein	-
ACL43R_RS02095 (ACL43R_02095)	-	428804..429979 (+)	1176	WP_096368625.1	SLC13 family permease	-
ACL43R_RS02100 (ACL43R_02100)	comEA/celA/cilE	430037..430678 (+)	642	WP_165711419.1	helix-hairpin-helix domain-containing protein	Machinery gene
ACL43R_RS02105 (ACL43R_02105)	comEC	430698..432908 (+)	2211	WP_416037664.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
ACL43R_RS02110 (ACL43R_02110)	-	433063..433839 (+)	777	WP_185767510.1	alpha/beta hydrolase	-
ACL43R_RS02115 (ACL43R_02115)	-	434035..434250 (+)	216	WP_003135074.1	F0F1 ATP synthase subunit C	-
ACL43R_RS02120 (ACL43R_02120)	atpB	434305..435018 (+)	714	WP_017368853.1	F0F1 ATP synthase subunit A	-
ACL43R_RS02125 (ACL43R_02125)	atpF	435032..435538 (+)	507	WP_017368854.1	F0F1 ATP synthase subunit B	-
ACL43R_RS02130 (ACL43R_02130)	-	435553..436080 (+)	528	WP_017368855.1	F0F1 ATP synthase subunit delta	-
ACL43R_RS02135 (ACL43R_02135)	atpA	436146..437654 (+)	1509	WP_004259170.1	F0F1 ATP synthase subunit alpha	-

Sequence

Protein

• Length: 736 a.a.
• Molecular weight: 84796.80 Da
• Isoelectric Point: 9.9010

>NTDB_id=1097145 ACL43R_RS02105 WP_416037664.1 430698..432908(+) (comEC) [Lactococcus formosensis strain JAL11]
MKQKFSLIYLVYLLVLVYFLIFSFSWPIIVFSLFSIIVALYRQYYGLLALLLCFSLFLHMVKKEDELQENKQPAKISKIT
PYMDTLQVNGSRLSFRGEVDGRDYQAFYTLSSEKEKEYFKNLAVKGTLYLEGTLEIPEGQRNFTGFDYRKYLRTQGIYRL
LEIEKIHGFEQTYEFDLRLIRRRAILWTQEHFPAPMSSYMTGLLFGWLDKDFEEMEELYTSLGIIHLFALSGMQVNFFIE
LLRNVLLRLGLSRKLVFFIQIPFSIFYAFLTGLSLSILRALLQKNIPFKNPSDRFSITFLLLIVFSPYFLLTTGGQLTML
YSFLITFISRKFKEVKGLKKSLLDSTVLAVGVLPLFVFHFHSFQPLSIILTLLFSMIFDFLLLPGLLFVFLLSLLGINLT
LLNPFFVVLESVVKLVGNLFDKPIVFGKPDVIFLLLLFILSGLILDFYKKRNWNLVIILVLFCIFFLVKNPKHPSITMVD
VGQGDSILLQDSWNSKNILIDTGGRLKIRTDEHWREGSYKSNAERTLLPYLRARGVSKIDALIVTHPDEDHIGDLKSVAQ
KVPIKNIYVSASALEKQIFVKKLSSLKRQIHIVQEGDKIPIFNSYLRFLTTGGEGKSDNDNSLVTFGEFYGKKFLFTGDL
EEEGEAKLQKGYSHLEVDILKVGHHGSKTSTKEGFLEAIKPKIALISAGKNNRYKHPSQETLHQLTARGIKIYRTDQQGA
IRLLYKKGSWHIQTVK

Nucleotide

• Length: 2211 bp

>NTDB_id=1097145 ACL43R_RS02105 WP_416037664.1 430698..432908(+) (comEC) [Lactococcus formosensis strain JAL11]
ATGAAACAAAAATTTTCGCTTATCTATTTAGTTTATCTCTTGGTTTTGGTTTATTTTCTTATTTTTAGTTTTTCGTGGCC
TATTATTGTTTTTAGCCTTTTCAGTATTATTGTTGCTTTATATCGTCAATATTATGGTTTGTTAGCTCTTTTACTATGCT
TTAGCTTGTTCTTACACATGGTTAAAAAAGAAGATGAATTGCAAGAAAATAAACAACCAGCAAAGATTTCTAAAATCACA
CCCTACATGGATACTCTTCAAGTGAATGGAAGTAGGCTCAGTTTTAGAGGTGAAGTAGATGGAAGAGATTATCAAGCTTT
TTACACGTTGTCTTCTGAAAAAGAGAAAGAATACTTTAAAAATCTTGCCGTAAAGGGGACATTATATCTTGAAGGTACTT
TGGAGATTCCAGAGGGACAGCGAAACTTTACTGGCTTTGATTATAGAAAGTATTTAAGAACTCAAGGTATTTATCGACTT
CTCGAAATAGAAAAAATTCATGGCTTTGAACAAACATATGAATTTGATTTACGTCTTATACGTAGAAGAGCTATCCTTTG
GACACAGGAACATTTTCCAGCACCGATGTCCTCCTATATGACAGGACTTCTGTTTGGTTGGCTAGATAAAGACTTTGAAG
AAATGGAGGAGCTCTACACTAGTCTCGGTATTATCCATTTATTTGCTTTGTCAGGTATGCAAGTGAATTTTTTTATTGAA
CTCCTTCGAAATGTTTTACTAAGACTAGGCTTATCACGAAAGTTAGTCTTTTTTATCCAGATTCCCTTTTCGATATTTTA
TGCATTTCTTACAGGCTTATCTCTTTCAATCTTACGTGCGCTTCTACAAAAAAATATCCCTTTTAAAAATCCAAGCGATA
GATTTTCTATCACTTTTCTTCTTTTAATAGTGTTCAGTCCATATTTTCTACTGACTACAGGGGGACAATTGACGATGCTC
TATTCTTTCTTAATCACGTTCATATCGCGAAAATTCAAAGAAGTGAAAGGATTAAAAAAGTCTTTACTTGATTCTACTGT
TTTAGCTGTAGGAGTCCTTCCGCTTTTTGTTTTTCATTTCCATAGTTTTCAGCCATTATCGATAATATTGACTTTACTAT
TCAGTATGATCTTTGATTTTTTACTCTTACCTGGTTTGCTTTTTGTTTTTCTCCTTTCTTTACTTGGTATTAATCTGACA
TTGCTTAATCCTTTTTTTGTTGTTTTAGAATCAGTAGTAAAGCTGGTTGGGAATTTATTCGACAAACCAATTGTGTTTGG
AAAACCAGATGTTATATTTTTACTTTTACTTTTTATTCTGAGTGGACTTATACTGGATTTTTATAAAAAAAGAAATTGGA
ATTTAGTCATAATACTTGTTCTTTTCTGTATTTTTTTTCTGGTTAAGAATCCTAAACACCCAAGTATTACAATGGTGGAT
GTGGGACAAGGAGACAGTATTCTCTTGCAGGACAGCTGGAACAGTAAAAATATCCTAATAGATACTGGCGGTAGATTAAA
GATAAGAACTGATGAGCACTGGAGGGAAGGAAGCTATAAAAGTAATGCGGAGCGTACACTTCTCCCTTATCTGAGAGCGC
GTGGAGTGAGTAAGATAGATGCCCTGATAGTGACACATCCAGATGAGGATCATATTGGAGACTTGAAGAGTGTAGCTCAG
AAAGTACCAATAAAAAATATTTATGTCTCAGCTAGTGCATTAGAGAAGCAAATTTTTGTGAAAAAACTAAGCAGCTTAAA
ACGTCAGATTCACATTGTGCAAGAGGGAGACAAGATTCCCATATTTAACAGCTATCTCCGATTTTTAACGACAGGAGGTG
AAGGAAAAAGCGATAATGATAATTCTTTAGTGACATTTGGTGAATTTTATGGGAAGAAATTTCTTTTTACAGGTGACTTA
GAAGAAGAGGGAGAGGCTAAACTCCAGAAAGGATATTCACATTTAGAGGTTGATATCCTAAAAGTTGGACATCACGGCAG
TAAGACTTCTACAAAGGAAGGTTTTTTAGAAGCAATTAAGCCTAAGATTGCTCTTATTTCTGCTGGAAAAAATAATCGAT
ATAAACATCCGAGTCAAGAGACGCTTCACCAATTAACTGCACGAGGAATAAAAATTTATCGGACAGACCAGCAAGGAGCG
ATCCGTCTCCTATATAAAAAAGGCAGCTGGCACATTCAAACAGTAAAGTAA

Domains

Predicted by InterproScan.

• Metallo-beta-lactamase superfamily (Lactamase_B) (481-689)

• Competence protein (Competence) (203-445)

• Domain of unknown function (DUF4131) (DUF4131) (21-166)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEC	Lactococcus lactis subsp. cremoris KW2	51.842	99.592	0.516
comEC/celB	Streptococcus mitis SK321	45.576	100	0.462
comEC/celB	Streptococcus mitis NCTC 12261	44.161	100	0.447
comEC/celB	Streptococcus pneumoniae TIGR4	43.683	100	0.442
comEC/celB	Streptococcus pneumoniae Rx1	43.548	100	0.44
comEC/celB	Streptococcus pneumoniae D39	43.548	100	0.44
comEC/celB	Streptococcus pneumoniae R6	43.548	100	0.44