Detailed information NTG1096529

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: ACMXYW_RS01005
• Genome accession: NZ_CP180555
• Coordinates: 226880..228394 (+)
• Length: 504 a.a.
• NCBI ID: WP_415904899.1
• Uniprot ID: -
• Organism: Neptuniibacter sp. QD48_55
• Function: require for natural transformation (predicted from homology) Unclear

Genomic Context

Location: 221880..233394

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACMXYW_RS00980 (ACMXYW_00980)	glnK	222374..222712 (-)	339	WP_415889925.1	P-II family nitrogen regulator	-
ACMXYW_RS00985 (ACMXYW_00985)	-	222910..224166 (-)	1257	WP_415904896.1	ammonium transporter	-
ACMXYW_RS00990 (ACMXYW_00990)	-	224206..224544 (-)	339	WP_415899815.1	P-II family nitrogen regulator	-
ACMXYW_RS00995 (ACMXYW_00995)	-	224829..225083 (+)	255	WP_415904897.1	accessory factor UbiK family protein	-
ACMXYW_RS01000 (ACMXYW_01000)	-	225120..226766 (+)	1647	WP_415904898.1	diguanylate cyclase domain-containing protein	-
ACMXYW_RS01005 (ACMXYW_01005)	comM	226880..228394 (+)	1515	WP_415904899.1	YifB family Mg chelatase-like AAA ATPase	Machinery gene
ACMXYW_RS01010 (ACMXYW_01010)	-	228404..230122 (-)	1719	WP_415899819.1	EAL domain-containing protein	-
ACMXYW_RS01015 (ACMXYW_01015)	rep	230380..232389 (+)	2010	WP_415904900.1	DNA helicase Rep	-
ACMXYW_RS01020 (ACMXYW_01020)	-	232449..232868 (-)	420	WP_415883153.1	c-type cytochrome	-

Sequence

Protein

• Length: 504 a.a.
• Molecular weight: 54295.29 Da
• Isoelectric Point: 7.2040

>NTDB_id=1096529 ACMXYW_RS01005 WP_415904899.1 226880..228394(+) (comM) [Neptuniibacter sp. QD48_55]
MSLAIAYTRAQVGIDAPAVTVEVHLSGGLPSFSIVGLPEAAVKESRERVRSALINSGFEFPQRRITVNLAPADLPKEGGR
YDLAIAVGILAATNQLPAKSLADVELIGELALSGELRPVTGVLPVALACRSEQRHLLLPEMNQNEALMASDLSVLPAGHL
LQVCAHLQGSELIPVAQAKDQPLSTDAFGPDLGDVKGQAQAKRALEVAAAGGHNILLVGPPGSGKSMLANRLPGLLPQMT
EQEALEVAAVYSITQSSSETRLPRKRPFRAPHHTASSVALVGGGGNPKPGEISLAHQGILFLDELPEFSRKVLEVLREPL
ESGEILISRAARQSTFPAQFQLVTAMNPCPCGYYADGTDRCRCSPDQIRRYQGKVSGPLLDRIDLQLSVQALSQQEMIEI
PQAQESSQSVRERVVKSRQVQLSRQGVPNQALTGPQLETLCQIEQKDKEMLAKALEKLQLSARAYHRVLRVARTIADLAD
SEKVERSHLMEALSYRVAARSSLN

Nucleotide

• Length: 1515 bp

>NTDB_id=1096529 ACMXYW_RS01005 WP_415904899.1 226880..228394(+) (comM) [Neptuniibacter sp. QD48_55]
ATGTCTTTAGCGATAGCATATACGCGCGCGCAGGTCGGAATTGATGCGCCTGCGGTTACCGTCGAGGTTCACCTGTCTGG
TGGCCTTCCAAGTTTTTCAATAGTTGGGTTGCCTGAGGCTGCGGTAAAAGAAAGTCGCGAACGGGTACGTAGTGCTCTGA
TTAATTCAGGTTTTGAATTTCCCCAACGTCGTATTACGGTCAATTTAGCCCCAGCTGACCTGCCAAAAGAGGGTGGGCGC
TACGATTTAGCTATTGCAGTAGGTATCTTGGCGGCTACTAATCAATTGCCAGCCAAATCATTAGCCGATGTCGAACTGAT
TGGCGAATTAGCCCTTTCGGGTGAGTTGCGACCTGTGACTGGGGTATTACCGGTTGCGCTCGCGTGCCGCTCCGAGCAGC
GTCATCTGTTGCTACCCGAGATGAACCAAAATGAAGCGTTAATGGCCTCGGACTTATCTGTATTACCCGCAGGTCACCTA
CTGCAAGTCTGTGCGCATCTACAAGGTTCTGAGTTAATTCCAGTTGCGCAGGCAAAAGATCAGCCTTTATCCACCGATGC
TTTTGGGCCGGATCTGGGCGATGTTAAAGGTCAGGCGCAAGCAAAACGCGCTTTAGAGGTGGCAGCTGCGGGTGGTCATA
ATATTTTGCTGGTGGGGCCGCCAGGGAGTGGTAAAAGCATGTTGGCTAACCGTTTGCCAGGGTTGTTACCGCAGATGACT
GAGCAGGAAGCGCTGGAGGTGGCTGCGGTTTACTCTATTACTCAAAGTAGTAGTGAAACTCGTTTACCCAGAAAGCGACC
TTTCCGCGCACCCCATCACACAGCTTCGTCTGTCGCGCTGGTTGGTGGTGGCGGAAACCCGAAACCAGGTGAGATTTCAT
TAGCGCATCAAGGCATCCTCTTTTTGGATGAGTTGCCTGAATTTAGTCGCAAAGTGTTGGAAGTACTGCGAGAACCGTTG
GAATCGGGTGAGATTTTAATATCACGGGCTGCACGGCAATCGACGTTTCCAGCGCAATTCCAGTTAGTAACAGCTATGAA
TCCATGCCCTTGTGGTTATTACGCTGATGGTACGGACCGCTGTCGCTGTAGTCCTGACCAGATAAGGCGTTATCAAGGCA
AGGTGTCTGGGCCGTTGTTAGATCGTATTGATCTGCAGTTGAGCGTTCAGGCGCTGTCACAGCAGGAGATGATTGAAATT
CCCCAAGCCCAAGAGTCCAGTCAGTCAGTGCGTGAAAGAGTGGTGAAATCTCGCCAAGTTCAACTCAGCCGCCAAGGCGT
ACCTAATCAGGCATTAACAGGGCCGCAGTTAGAAACACTCTGCCAGATAGAGCAAAAAGACAAAGAGATGCTCGCTAAAG
CATTAGAGAAGTTGCAGTTGTCGGCGAGGGCTTATCATCGTGTCTTAAGAGTGGCGAGAACTATTGCAGATTTAGCTGAC
TCCGAGAAGGTCGAGCGTTCGCATCTGATGGAAGCGTTAAGTTATAGGGTCGCGGCTAGAAGTAGTTTGAATTGA

Domains

Predicted by InterproScan.

• Subunit ChlI of Mg-chelatase (ChlI) (21-142)

• Magnesium chelatase, subunit ChlI (Mg_chelatase) (191-396)

• Magnesium chelatase, subunit ChlI C-terminal (Mg_chelatase_C) (404-496)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Haemophilus influenzae Rd KW20	54.274	99.802	0.542
comM	Vibrio campbellii strain DS40M4	54.2	99.206	0.538
comM	Legionella pneumophila str. Paris	54.108	99.008	0.536
comM	Legionella pneumophila strain ERS1305867	54.108	99.008	0.536
comM	Vibrio cholerae strain A1552	53.586	99.603	0.534
comM	Glaesserella parasuis strain SC1401	52.286	99.802	0.522
RA0C_RS07335	Riemerella anatipestifer ATCC 11845 = DSM 15868	45.079	100	0.454