Detailed information NTG1096483

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: ACMXYU_RS01120
• Genome accession: NZ_CP180551
• Coordinates: 249213..250727 (+)
• Length: 504 a.a.
• NCBI ID: WP_415899818.1
• Uniprot ID: -
• Organism: Neptuniibacter sp. QD48_11
• Function: require for natural transformation (predicted from homology) Unclear

Genomic Context

Location: 244213..255727

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACMXYU_RS01095 (ACMXYU_01095)	glnK	244707..245045 (-)	339	WP_415889925.1	P-II family nitrogen regulator	-
ACMXYU_RS01100 (ACMXYU_01100)	-	245243..246499 (-)	1257	WP_415899813.1	ammonium transporter	-
ACMXYU_RS01105 (ACMXYU_01105)	-	246538..246876 (-)	339	WP_415899815.1	P-II family nitrogen regulator	-
ACMXYU_RS01110 (ACMXYU_01110)	-	247162..247416 (+)	255	WP_415899816.1	accessory factor UbiK family protein	-
ACMXYU_RS01115 (ACMXYU_01115)	-	247453..249099 (+)	1647	WP_415899817.1	diguanylate cyclase domain-containing protein	-
ACMXYU_RS01120 (ACMXYU_01120)	comM	249213..250727 (+)	1515	WP_415899818.1	YifB family Mg chelatase-like AAA ATPase	Machinery gene
ACMXYU_RS01125 (ACMXYU_01125)	-	250737..252455 (-)	1719	WP_415899819.1	EAL domain-containing protein	-
ACMXYU_RS01130 (ACMXYU_01130)	rep	252715..254724 (+)	2010	WP_415899820.1	DNA helicase Rep	-
ACMXYU_RS01135 (ACMXYU_01135)	-	254784..255203 (-)	420	WP_415889933.1	c-type cytochrome	-

Sequence

Protein

• Length: 504 a.a.
• Molecular weight: 54274.28 Da
• Isoelectric Point: 6.9940

>NTDB_id=1096483 ACMXYU_RS01120 WP_415899818.1 249213..250727(+) (comM) [Neptuniibacter sp. QD48_11]
MSLAIAYTRAQVGIDAPAVTVEVHLSGGLPSFSIVGLPEAAVKESRERVRSALINSGFEFPQRRITVNLAPADLPKEGGR
YDLAIAVGILAATNQLPAKSLADVELIGELALSGELRPVTGVLPVALACRSEQRHLLLPEMNQNEALMASDLSVLPASHL
LQVCAHLQGSELISVAQAKDQPLSTDAFGPDLGDVKGQAQAKRALEVAAAGGHNILLVGPPGSGKSMLANRLPGLLPQMT
EQEALEVAAVYSITQSSSETRLPRKRPFRAPHHTASSVALVGGGGNPKPGEISLAHQGILFLDELPEFSRKVLEVLREPL
ESGEILISRAARQSTFPAQFQLVTAMNPCPCGYYADGTDRCRCSPDQIRRYQGKVSGPLLDRIDLQLSVQALSQQEMIEI
PQAQESSQSVCERVVKSRQVQLSRQGVPNQALTGPQLEILCQIEQKDKEMLAKALEKLQLSARAYHRVLRVARTIADLAD
SEKVERSHLMEALSYRVAARSSLN

Nucleotide

• Length: 1515 bp

>NTDB_id=1096483 ACMXYU_RS01120 WP_415899818.1 249213..250727(+) (comM) [Neptuniibacter sp. QD48_11]
ATGTCTTTAGCGATAGCATATACGCGCGCGCAGGTAGGAATTGATGCACCTGCGGTTACTGTCGAAGTTCACCTATCTGG
TGGCCTTCCAAGTTTTTCAATAGTTGGGTTGCCTGAGGCTGCGGTAAAAGAAAGTCGCGAACGGGTACGTAGTGCTCTGA
TTAATTCAGGTTTTGAATTTCCCCAACGTCGTATTACGGTCAATTTAGCCCCAGCTGACCTGCCAAAAGAGGGTGGGCGT
TATGATTTAGCCATTGCTGTAGGTATCTTGGCGGCTACTAATCAATTGCCAGCCAAATCATTAGCTGATGTCGAACTGAT
TGGCGAATTAGCCCTTTCGGGTGAGTTGCGACCTGTGACTGGGGTATTACCGGTTGCGCTCGCGTGCCGCTCCGAGCAGC
GTCATCTGTTGCTACCCGAGATGAACCAAAATGAAGCGTTAATGGCCTCGGACTTATCTGTATTACCCGCAAGTCACCTA
CTGCAAGTCTGTGCGCATCTACAAGGTTCTGAGTTAATTTCAGTTGCGCAGGCAAAAGATCAGCCTTTATCCACCGATGC
TTTTGGGCCGGATCTGGGCGATGTTAAAGGTCAGGCGCAAGCAAAACGCGCTTTAGAGGTGGCAGCTGCGGGTGGTCATA
ATATTTTGCTGGTGGGGCCGCCAGGGAGTGGTAAAAGCATGTTGGCTAACCGTTTGCCAGGGTTGTTACCGCAGATGACT
GAGCAGGAAGCGCTGGAGGTGGCTGCGGTTTACTCTATTACTCAAAGTAGTAGTGAAACTCGTTTACCCAGAAAGCGACC
TTTCCGCGCACCCCATCACACAGCTTCGTCTGTCGCGCTGGTTGGTGGTGGTGGAAACCCGAAACCAGGTGAGATTTCAT
TAGCGCATCAAGGCATCCTCTTTTTGGATGAGTTGCCTGAATTTAGTCGCAAAGTGTTGGAAGTACTGCGAGAACCGTTG
GAATCGGGTGAGATTTTAATATCACGGGCTGCACGGCAATCGACGTTTCCAGCGCAATTCCAGTTAGTAACAGCTATGAA
TCCATGCCCTTGTGGTTATTACGCTGATGGTACGGACCGCTGTCGCTGTAGTCCTGACCAGATAAGGCGTTATCAAGGCA
AGGTGTCTGGGCCGTTGTTAGATCGTATTGATCTGCAGTTGAGCGTTCAGGCGCTGTCACAGCAGGAGATGATTGAAATT
CCCCAAGCCCAAGAGTCCAGTCAGTCAGTGTGTGAAAGAGTGGTGAAATCTCGCCAAGTTCAACTCAGCCGCCAAGGCGT
ACCTAATCAGGCATTAACAGGGCCGCAGTTAGAAATACTCTGCCAGATAGAGCAAAAAGACAAAGAGATGCTCGCTAAAG
CATTAGAGAAGTTGCAGTTGTCGGCGAGGGCTTATCATCGTGTATTAAGAGTGGCGAGAACTATTGCAGATTTAGCTGAC
TCCGAGAAGGTCGAGCGTTCGCATCTGATGGAAGCGTTAAGTTATAGGGTCGCGGCTAGAAGTAGTTTGAATTGA

Domains

Predicted by InterproScan.

• Magnesium chelatase, subunit ChlI C-terminal (Mg_chelatase_C) (404-496)

• Magnesium chelatase, subunit ChlI (Mg_chelatase) (191-396)

• Subunit ChlI of Mg-chelatase (ChlI) (21-142)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Haemophilus influenzae Rd KW20	53.877	99.802	0.538
comM	Vibrio campbellii strain DS40M4	54.2	99.206	0.538
comM	Legionella pneumophila strain ERS1305867	54.108	99.008	0.536
comM	Legionella pneumophila str. Paris	54.108	99.008	0.536
comM	Vibrio cholerae strain A1552	53.586	99.603	0.534
comM	Glaesserella parasuis strain SC1401	52.071	100	0.524
RA0C_RS07335	Riemerella anatipestifer ATCC 11845 = DSM 15868	44.882	100	0.452