Detailed information NTG1096414

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: ACMXYX_RS01050
• Genome accession: NZ_CP180547
• Coordinates: 251116..252630 (+)
• Length: 504 a.a.
• NCBI ID: WP_415897343.1
• Uniprot ID: -
• Organism: Neptuniibacter sp. QD72_48
• Function: DNA binding (predicted from homology) DNA binding and uptake

Genomic Context

Location: 246116..257630

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACMXYX_RS01025 (ACMXYX_01025)	glnK	246609..246947 (-)	339	WP_415883145.1	P-II family nitrogen regulator	-
ACMXYX_RS01030 (ACMXYX_01030)	-	247146..248402 (-)	1257	WP_415883146.1	ammonium transporter	-
ACMXYX_RS01035 (ACMXYX_01035)	-	248440..248778 (-)	339	WP_415883147.1	P-II family nitrogen regulator	-
ACMXYX_RS01040 (ACMXYX_01040)	-	249062..249316 (+)	255	WP_415883148.1	accessory factor UbiK family protein	-
ACMXYX_RS01045 (ACMXYX_01045)	-	249353..251002 (+)	1650	WP_415897342.1	diguanylate cyclase domain-containing protein	-
ACMXYX_RS01050 (ACMXYX_01050)	comM	251116..252630 (+)	1515	WP_415897343.1	YifB family Mg chelatase-like AAA ATPase	Machinery gene
ACMXYX_RS01055 (ACMXYX_01055)	-	252635..254353 (-)	1719	WP_415897344.1	EAL domain-containing protein	-
ACMXYX_RS01060 (ACMXYX_01060)	rep	254611..256620 (+)	2010	WP_415906386.1	DNA helicase Rep	-
ACMXYX_RS01065 (ACMXYX_01065)	-	256680..257099 (-)	420	WP_415883153.1	c-type cytochrome	-

Sequence

Protein

• Length: 504 a.a.
• Molecular weight: 54171.25 Da
• Isoelectric Point: 7.6643

>NTDB_id=1096414 ACMXYX_RS01050 WP_415897343.1 251116..252630(+) (comM) [Neptuniibacter sp. QD72_48]
MSLAIAYTRAQVGIDAPAVTVEVHLSGGLPSFSIVGLPEAAVKESRERVRSALINSGFEFPQRRITVNLAPADLPKEGGR
YDLAIAVGILAATNQLPAKSLADVELIGELALSGELRPVTGVLPVALACRSEQRHLLLPDMNQAEALMASGLSVLPAGHL
LQVCAHLQGSELISVAQAQVQPLSTDAFGPDLGDVKGQAQAKRALEVAAAGGHNILLVGPPGSGKSMLANRLPGLLPQMT
EQEALEVAAVYSITQSSSETRLPRKRPFRAPHHTASSVALVGGGGNPKPGEISLAHQGILFLDELPEFSRKVLEVLREPL
ESGEILISRAARQSTFPAQFQLVTAMNPCPCGYYADGTDRCRCSPDQIRRYQGKVSGPLLDRIDLQLSVQALSQQEMIEV
PKTQESSESVRERVVRCRQVQLSRQSVPNQALTGPQLETLCQIEQKDKEMLAKALEKLQLSARAYHRVLRVARTIADLAS
SEVVQRAHLMEALSYRVAARSSLN

Nucleotide

• Length: 1515 bp

>NTDB_id=1096414 ACMXYX_RS01050 WP_415897343.1 251116..252630(+) (comM) [Neptuniibacter sp. QD72_48]
ATGTCTTTAGCGATAGCGTATACGCGCGCGCAGGTAGGGATAGATGCACCTGCGGTTACGGTCGAGGTCCATTTATCTGG
TGGCCTTCCTAGTTTTTCCATAGTTGGGTTGCCTGAAGCTGCGGTGAAAGAAAGCCGCGAACGGGTGCGTAGTGCTCTGA
TTAATTCAGGTTTTGAATTCCCTCAACGGCGTATCACGGTCAATTTAGCTCCCGCTGATCTACCGAAAGAGGGTGGGCGG
TACGATTTAGCCATTGCTGTAGGTATCTTGGCGGCTACCAATCAATTGCCAGCCAAATCATTAGCTGATGTCGAATTGAT
TGGCGAATTGGCCCTTTCGGGCGAGTTGCGGCCCGTGACTGGCGTTTTACCGGTTGCCCTAGCGTGCCGCTCCGAGCAGC
GCCATTTGTTGTTACCTGATATGAACCAGGCTGAAGCGCTGATGGCCTCGGGCTTATCGGTATTGCCGGCAGGTCATTTG
CTTCAAGTTTGTGCTCATCTACAAGGTTCTGAGTTGATTTCAGTTGCGCAGGCACAAGTTCAGCCTTTGTCCACTGATGC
TTTTGGGCCTGATCTGGGCGATGTTAAAGGGCAGGCGCAAGCAAAACGCGCTTTAGAGGTGGCTGCCGCGGGTGGTCATA
ATATTTTGCTGGTGGGGCCTCCAGGCAGTGGTAAAAGTATGTTGGCTAACCGTTTGCCGGGGTTGTTACCGCAGATGACC
GAACAGGAAGCGCTCGAGGTGGCTGCGGTTTATTCTATTACTCAAAGTAGTAGTGAAACACGTTTACCCAGAAAGCGACC
TTTCCGCGCACCACATCATACGGCTTCGTCTGTAGCACTTGTGGGAGGTGGCGGAAATCCTAAACCTGGTGAAATTTCTT
TAGCCCATCAAGGTATTCTTTTCTTGGATGAATTGCCTGAATTTAGTCGCAAAGTGTTGGAGGTGCTGCGTGAGCCGCTG
GAATCAGGTGAGATCTTAATTTCTCGAGCTGCCCGGCAATCGACGTTCCCAGCACAATTTCAATTAGTGACAGCCATGAA
CCCTTGTCCTTGTGGCTATTACGCTGATGGTACAGATCGCTGTCGTTGCAGCCCTGATCAGATAAGACGTTATCAAGGCA
AGGTTTCTGGACCGTTGTTAGACCGTATTGATCTGCAGTTGAGTGTTCAGGCGCTGTCACAACAAGAGATGATTGAAGTT
CCAAAAACACAAGAATCAAGTGAGTCTGTTCGCGAGAGGGTAGTGCGGTGCCGCCAAGTTCAACTCAGCCGTCAGAGTGT
ACCTAATCAAGCGTTAACGGGACCGCAGCTAGAGACGCTTTGCCAGATAGAACAGAAAGATAAGGAAATGTTAGCGAAAG
CGTTAGAGAAACTGCAGTTATCCGCAAGAGCTTATCATCGTGTATTAAGGGTGGCGCGAACGATTGCAGACTTAGCCAGT
TCTGAAGTGGTGCAAAGGGCGCATCTAATGGAAGCATTAAGCTATAGGGTGGCGGCTAGGAGTAGTTTGAATTGA

Domains

Predicted by InterproScan.

• Subunit ChlI of Mg-chelatase (ChlI) (21-142)

• Magnesium chelatase, subunit ChlI (Mg_chelatase) (191-396)

• Magnesium chelatase, subunit ChlI C-terminal (Mg_chelatase_C) (404-496)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Legionella pneumophila strain ERS1305867	54.2	99.206	0.538
comM	Legionella pneumophila str. Paris	54.2	99.206	0.538
comM	Vibrio cholerae strain A1552	53.785	99.603	0.536
comM	Vibrio campbellii strain DS40M4	53.8	99.206	0.534
comM	Haemophilus influenzae Rd KW20	53.479	99.802	0.534
comM	Glaesserella parasuis strain SC1401	51.889	99.802	0.518
RA0C_RS07335	Riemerella anatipestifer ATCC 11845 = DSM 15868	45.079	100	0.454