Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicK   Type   Regulator
Locus tag   ACGHT2_RS07895 Genome accession   NZ_AP031455
Coordinates   1507398..1508750 (-) Length   450 a.a.
NCBI ID   WP_390578273.1    Uniprot ID   -
Organism   Streptococcus pasteurianus strain k46-0107-A9     
Function   repress comCDE expression; repress comX expression (predicted from homology)   
Competence regulation

Genomic Context

Location: 1502398..1513750
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACGHT2_RS07885 (K460107A9_14670) rnc 1505648..1506334 (-) 687 WP_270619892.1 ribonuclease III -
  ACGHT2_RS07890 (K460107A9_14680) vicX 1506588..1507397 (-) 810 WP_003065766.1 MBL fold metallo-hydrolase Regulator
  ACGHT2_RS07895 (K460107A9_14690) vicK 1507398..1508750 (-) 1353 WP_390578273.1 cell wall metabolism sensor histidine kinase VicK Regulator
  ACGHT2_RS07900 (K460107A9_14700) vicR 1508743..1509453 (-) 711 WP_003065770.1 response regulator YycF Regulator
  ACGHT2_RS07905 (K460107A9_14710) - 1509758..1510522 (+) 765 WP_003065772.1 amino acid ABC transporter ATP-binding protein -
  ACGHT2_RS07910 (K460107A9_14720) - 1510533..1511345 (+) 813 WP_390578276.1 transporter substrate-binding domain-containing protein -
  ACGHT2_RS07915 (K460107A9_14730) - 1511362..1512066 (+) 705 WP_117575586.1 amino acid ABC transporter permease -
  ACGHT2_RS07920 (K460107A9_14740) - 1512078..1512725 (+) 648 WP_003065777.1 amino acid ABC transporter permease -
  ACGHT2_RS07925 (K460107A9_14750) - 1512818..1513426 (-) 609 WP_268700241.1 TVP38/TMEM64 family protein -

Sequence

Protein


Download         Length: 450 a.a.        Molecular weight: 51374.48 Da        Isoelectric Point: 4.7670

>NTDB_id=109624 ACGHT2_RS07895 WP_390578273.1 1507398..1508750(-) (vicK) [Streptococcus pasteurianus strain k46-0107-A9]
MNDTMLQNLTYFEQAILFLLAFVAVYFVYLAIRDYRTSVNIRRLSGKVRELITGKYTEDIIIEKDRDLAELADQLNDLST
VFRLAQENLAQEKNRLASILSYMTDGVLATDRAGNITMINQTALQQLNLEQEEALQMNIVDILGADSTYSYHDLVSKTPK
IVLNRRDGTGEFITLRIRFALNRRDSGFISGLIAVLHDTTEQEKEDRDRRLFVSNVSHELRTPLTSVKSYLEALDEGALK
EDIAPSFIKVSLDETNRMIRMISDLLNLSRIDNQTVQLEVEMTNFTAFMTSILNRFDQIKSQHTISGKQYEIVRDYPIKS
IWLEIDPDKMTQVLDNILNNAIKYSPDGGKITVSMKTTETQLIISISDEGLGIPKKDLPLIFDRFYRVDKARSRAQGGSG
LGLAIAKEIVKQHKGFIWAQSTYGKGSTFTIVLPYEKDSEIYDEWEDEEE

Nucleotide


Download         Length: 1353 bp        

>NTDB_id=109624 ACGHT2_RS07895 WP_390578273.1 1507398..1508750(-) (vicK) [Streptococcus pasteurianus strain k46-0107-A9]
ATGAATGATACAATGTTACAAAATTTAACTTATTTTGAACAAGCCATTCTCTTTCTTTTAGCATTTGTCGCAGTTTATTT
TGTTTATTTAGCGATAAGAGATTATCGAACTTCTGTTAATATTCGACGTTTGAGTGGTAAAGTGCGAGAGCTTATCACAG
GAAAATATACAGAAGATATTATTATTGAAAAAGATAGAGACTTAGCTGAGTTAGCTGACCAATTAAATGATTTGTCAACA
GTCTTTCGTTTAGCACAGGAAAATTTGGCGCAAGAAAAGAATCGTTTAGCAAGTATCTTATCCTATATGACAGACGGTGT
CTTGGCGACTGACCGTGCTGGAAATATCACAATGATTAATCAAACCGCGCTACAACAACTCAATTTAGAGCAAGAAGAAG
CTTTGCAGATGAATATTGTTGATATTTTAGGAGCTGATAGTACTTATAGTTATCATGATTTGGTGTCAAAAACACCTAAA
ATTGTCTTGAACCGTCGTGACGGAACAGGTGAATTTATTACTTTACGTATTCGATTTGCTCTAAATCGTCGTGATAGTGG
CTTTATTTCAGGGTTGATTGCTGTTTTGCATGACACAACCGAACAAGAAAAAGAAGACCGTGATCGTCGCCTTTTCGTTT
CTAATGTTAGTCATGAATTGCGAACACCATTAACATCTGTAAAATCTTATCTGGAAGCTTTAGATGAAGGGGCACTCAAA
GAAGACATTGCGCCAAGCTTTATCAAAGTGTCTTTAGATGAAACAAACCGTATGATTCGTATGATTTCAGACTTACTTAA
TTTATCGCGTATTGATAATCAGACGGTTCAACTGGAAGTGGAAATGACCAATTTCACAGCTTTTATGACATCAATTCTTA
ACCGTTTTGATCAAATTAAAAGCCAACATACAATCAGTGGAAAACAGTATGAGATTGTCAGGGATTATCCGATTAAATCA
ATCTGGCTTGAAATTGATCCTGATAAGATGACGCAGGTTTTGGATAATATCCTTAATAATGCTATCAAATATTCACCAGA
TGGTGGAAAAATCACAGTTAGCATGAAAACGACGGAAACACAGTTGATTATCTCAATCTCTGATGAAGGGCTTGGTATTC
CTAAGAAAGATTTGCCATTGATTTTCGACCGTTTCTATCGTGTGGATAAGGCTCGAAGTCGTGCCCAAGGTGGTTCAGGA
CTCGGCTTAGCTATCGCAAAAGAAATTGTCAAACAACATAAAGGTTTTATTTGGGCACAAAGTACTTACGGAAAAGGGTC
GACCTTTACAATTGTACTTCCTTACGAAAAAGATTCTGAAATTTATGATGAATGGGAGGATGAAGAAGAGTAG

Domains

Predicted by InterproScan.

His Kinase A (phospho-acceptor) domain (HisKA)

(209-273)

PAS fold (PAS)

(95-189)

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(326-436)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicK Streptococcus mutans UA159

74.458

92.222

0.687
  micB Streptococcus pneumoniae Cp1015

65.566

94.222

0.618

Multiple sequence alignment