Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   ACGHT2_RS07890 Genome accession   NZ_AP031455
Coordinates   1506588..1507397 (-) Length   269 a.a.
NCBI ID   WP_003065766.1    Uniprot ID   A0AAW6YDK1
Organism   Streptococcus pasteurianus strain k46-0107-A9     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1501588..1512397
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACGHT2_RS07880 (K460107A9_14660) smc 1501977..1505516 (-) 3540 WP_270619919.1 chromosome segregation protein SMC -
  ACGHT2_RS07885 (K460107A9_14670) rnc 1505648..1506334 (-) 687 WP_270619892.1 ribonuclease III -
  ACGHT2_RS07890 (K460107A9_14680) vicX 1506588..1507397 (-) 810 WP_003065766.1 MBL fold metallo-hydrolase Regulator
  ACGHT2_RS07895 (K460107A9_14690) vicK 1507398..1508750 (-) 1353 WP_390578273.1 cell wall metabolism sensor histidine kinase VicK Regulator
  ACGHT2_RS07900 (K460107A9_14700) vicR 1508743..1509453 (-) 711 WP_003065770.1 response regulator YycF Regulator
  ACGHT2_RS07905 (K460107A9_14710) - 1509758..1510522 (+) 765 WP_003065772.1 amino acid ABC transporter ATP-binding protein -
  ACGHT2_RS07910 (K460107A9_14720) - 1510533..1511345 (+) 813 WP_390578276.1 transporter substrate-binding domain-containing protein -
  ACGHT2_RS07915 (K460107A9_14730) - 1511362..1512066 (+) 705 WP_117575586.1 amino acid ABC transporter permease -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 30343.37 Da        Isoelectric Point: 5.8277

>NTDB_id=109623 ACGHT2_RS07890 WP_003065766.1 1506588..1507397(-) (vicX) [Streptococcus pasteurianus strain k46-0107-A9]
MSENAFKYSILASGSTGNSFYVETPQKRFLIDAGLTGKKITSLLAEIDRKPEDLDAIFITHEHSDHIKGVGVLARRYNLD
VYANEKTWQMIDERNMIGKLDFAQKHIFERGKTLTLGDIDIESFGVSHDAVEPQFYRLMKDNKSFVILTDTGYVSDRMAG
IIENADGYLIESNHDVEILRSGAYPWSLKQRILSDKGHLSNEDGAGTMIRTIGNRTKKIYLGHLSKENNIKELAHMTMEN
NLIQADFGVGYDMKVFDTSPEEATPLTKL

Nucleotide


Download         Length: 810 bp        

>NTDB_id=109623 ACGHT2_RS07890 WP_003065766.1 1506588..1507397(-) (vicX) [Streptococcus pasteurianus strain k46-0107-A9]
ATGTCTGAAAATGCTTTTAAATATAGTATTTTAGCCTCCGGTTCAACTGGAAATTCTTTTTATGTGGAAACACCACAAAA
ACGTTTTTTGATTGATGCGGGTTTGACTGGTAAGAAAATTACCAGTCTTCTTGCTGAAATTGACCGCAAACCAGAGGACT
TAGATGCTATTTTTATTACACACGAACATTCTGACCATATCAAAGGGGTTGGGGTGTTAGCACGTCGTTATAATCTTGAT
GTTTATGCGAATGAAAAAACGTGGCAAATGATTGATGAGCGAAATATGATTGGAAAGCTTGATTTCGCTCAAAAACATAT
TTTTGAACGTGGTAAAACATTGACACTTGGTGACATTGATATTGAAAGTTTTGGTGTTAGCCACGATGCCGTTGAGCCAC
AATTTTATCGTTTGATGAAAGATAATAAATCGTTTGTTATCTTAACAGATACAGGTTATGTTAGTGACCGCATGGCAGGA
ATTATTGAAAATGCTGACGGTTACTTAATTGAATCAAATCATGATGTTGAGATTTTACGTTCTGGTGCTTATCCGTGGAG
TTTGAAACAACGTATCCTATCTGATAAAGGGCACTTGTCAAACGAAGACGGTGCTGGGACAATGATTCGAACCATTGGAA
ATCGCACGAAGAAAATTTACCTTGGACATTTGAGTAAAGAAAACAATATCAAAGAATTGGCTCACATGACCATGGAAAAT
AATCTTATTCAAGCTGACTTTGGGGTTGGTTATGACATGAAAGTCTTTGACACCTCACCAGAGGAAGCAACACCATTAAC
AAAGTTATAA

Domains

Predicted by InterproScan.

Beta-lactamase superfamily domain (Lactamase_B_2)

(28-216)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

76.952

100

0.77

Multiple sequence alignment