Detailed information NTG1094701

Bioinformatically predicted

Overview

• Name: comFA
• Type: Machinery gene
• Locus tag: ACLBKW_RS16500
• Genome accession: NZ_CP180232
• Coordinates: 3195681..3197060 (-)
• Length: 459 a.a.
• NCBI ID: WP_414834791.1
• Uniprot ID: -
• Organism: Bacillus altitudinis strain Ba
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3190681..3202060

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACLBKW_RS16460 (ACLBKW_16460)	flgL	3190864..3191775 (-)	912	WP_017368141.1	flagellar hook-associated protein FlgL	-
ACLBKW_RS16465 (ACLBKW_16465)	flgK	3191784..3193304 (-)	1521	WP_017368142.1	flagellar hook-associated protein FlgK	-
ACLBKW_RS16470 (ACLBKW_16470)	-	3193320..3193802 (-)	483	WP_008348261.1	flagellar protein FlgN	-
ACLBKW_RS16475 (ACLBKW_16475)	flgM	3193821..3194084 (-)	264	WP_003213252.1	flagellar biosynthesis anti-sigma factor FlgM	-
ACLBKW_RS16480 (ACLBKW_16480)	-	3194164..3194583 (-)	420	WP_017357864.1	TIGR03826 family flagellar region protein	-
ACLBKW_RS16485 (ACLBKW_16485)	comFC	3194640..3195107 (-)	468	WP_039169829.1	ComF family protein	Machinery gene
ACLBKW_RS16490 (ACLBKW_16490)	-	3195159..3195362 (-)	204	Protein_3191	hypothetical protein	-
ACLBKW_RS16495 (ACLBKW_16495)	-	3195323..3195616 (-)	294	WP_035701582.1	late competence development ComFB family protein	-
ACLBKW_RS16500 (ACLBKW_16500)	comFA	3195681..3197060 (-)	1380	WP_414834791.1	DEAD/DEAH box helicase	Machinery gene
ACLBKW_RS16505 (ACLBKW_16505)	-	3197180..3198022 (-)	843	WP_414834474.1	DegV family protein	-
ACLBKW_RS16510 (ACLBKW_16510)	degU	3198234..3198923 (-)	690	WP_008348273.1	two-component system response regulator DegU	Regulator
ACLBKW_RS16515 (ACLBKW_16515)	degS	3198988..3200163 (-)	1176	WP_003213166.1	sensor histidine kinase	Regulator
ACLBKW_RS16520 (ACLBKW_16520)	-	3200385..3201053 (+)	669	WP_017357860.1	YigZ family protein	-

Sequence

Protein

• Length: 459 a.a.
• Molecular weight: 52428.00 Da
• Isoelectric Point: 9.7778

>NTDB_id=1094701 ACLBKW_RS16500 WP_414834791.1 3195681..3197060(-) (comFA) [Bacillus altitudinis strain Ba]
MNLEKAMELSHKLQSRHLLPIECQCTQSELEWLENQGFIHRTPAVDRVAGGLICCRCGVSNKRYFALSPCETCKKDCVYC
RSCIMLGKVSECGFLYEWTGPQKKETRQVELTWQGELSKGQKRASDRLVEAIQNKFDLLVWAVCGAGKTEVLFHGIKYAL
NNGMSVCIATPRTDVVLELEPRMRKAFQGVNIAVLYGGSSQRFQMAPLMIATTHQLMRYKNAFDVLIVDEVDAFPYSMDE
RLQFAVLKSMKKTGVRIYLSATPSKKMQKDVARGQLEAIKIPLRFHQKPLPVPTFQWVGDWKKKLKRNRLPASTMNWLHE
HITKKKRVLLFVPSISTMKKVTHILQVQDVNVQGVSADDQERKQKVQHFRDHRYDVLVTTTILERGVTIQDVQVGVLGAE
SPIFTESALVQISGRAGRHPDFFNGDVYFFHFGLTRSMKQAKKHIVKMNNTAEEEFSEK

Nucleotide

• Length: 1380 bp

>NTDB_id=1094701 ACLBKW_RS16500 WP_414834791.1 3195681..3197060(-) (comFA) [Bacillus altitudinis strain Ba]
TTGAATCTGGAAAAAGCAATGGAACTCAGTCACAAGCTACAATCAAGGCATCTTCTTCCTATTGAATGTCAATGTACACA
GTCCGAATTGGAGTGGCTGGAGAATCAAGGATTCATCCATAGAACACCTGCTGTCGATAGGGTGGCGGGTGGTTTGATCT
GCTGCCGGTGCGGTGTATCAAACAAGCGCTACTTTGCCCTCTCTCCGTGTGAAACATGTAAAAAAGACTGTGTATACTGT
AGGTCCTGCATCATGCTGGGAAAAGTAAGTGAATGTGGCTTTCTCTATGAATGGACGGGTCCACAAAAGAAAGAAACAAG
ACAAGTTGAATTAACATGGCAGGGAGAGCTTTCTAAAGGGCAAAAGAGAGCGTCCGATAGACTAGTAGAAGCAATCCAAA
ACAAATTTGATCTGCTCGTTTGGGCTGTTTGTGGTGCGGGGAAAACGGAGGTGCTTTTTCACGGAATAAAATATGCGTTA
AATAACGGAATGAGTGTTTGTATTGCGACGCCTAGAACCGATGTTGTACTTGAGCTCGAACCTCGAATGAGGAAGGCATT
TCAAGGAGTGAATATAGCTGTACTTTATGGCGGGAGTTCTCAAAGATTTCAAATGGCACCGCTTATGATCGCTACAACCC
ATCAGCTAATGAGATATAAAAACGCTTTTGATGTCCTCATTGTAGACGAAGTCGATGCTTTTCCTTATTCAATGGATGAA
CGGCTTCAGTTTGCTGTTTTAAAGTCAATGAAAAAAACAGGAGTTAGAATTTACTTAAGTGCCACACCATCTAAAAAAAT
GCAAAAGGATGTTGCTCGTGGACAATTAGAAGCGATCAAAATTCCTCTGCGCTTCCACCAAAAACCGTTGCCTGTCCCAA
CATTTCAATGGGTTGGAGATTGGAAAAAGAAATTAAAAAGAAATCGGCTTCCAGCATCTACAATGAACTGGCTGCATGAA
CATATCACAAAGAAAAAAAGAGTGTTACTCTTTGTTCCTTCTATTTCTACTATGAAGAAGGTAACTCATATTCTTCAAGT
TCAAGATGTAAATGTACAGGGTGTTTCTGCGGATGATCAAGAAAGGAAGCAAAAAGTCCAGCATTTCAGAGATCATAGAT
ACGATGTATTGGTTACAACAACTATTCTAGAAAGAGGCGTTACTATTCAAGATGTTCAAGTGGGCGTATTAGGTGCGGAA
TCTCCTATTTTTACAGAAAGTGCACTTGTCCAAATTTCTGGTAGAGCAGGGAGACATCCAGATTTTTTTAACGGAGACGT
GTACTTTTTTCATTTTGGTTTAACGAGAAGTATGAAACAAGCAAAGAAACATATCGTAAAAATGAATAATACAGCTGAAG
AAGAGTTTTCTGAAAAATAG

Domains

Predicted by InterproScan.

• Type III restriction enzyme, res subunit (ResIII) (116-264)

• Helicase conserved C-terminal domain (Helicase_C) (320-419)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFA	Bacillus subtilis subsp. subtilis str. 168	52.135	96.95	0.505
comFA/cflA	Streptococcus mitis NCTC 12261	38.928	93.464	0.364
comFA/cflA	Streptococcus pneumoniae Rx1	38.747	93.9	0.364
comFA/cflA	Streptococcus pneumoniae D39	38.747	93.9	0.364
comFA/cflA	Streptococcus pneumoniae R6	38.747	93.9	0.364
comFA/cflA	Streptococcus pneumoniae TIGR4	38.515	93.9	0.362