Detailed information NTG1094703

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: ACLBKW_RS16515
• Genome accession: NZ_CP180232
• Coordinates: 3198988..3200163 (-)
• Length: 391 a.a.
• NCBI ID: WP_003213166.1
• Uniprot ID: -
• Organism: Bacillus altitudinis strain Ba
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3193988..3205163

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACLBKW_RS16480 (ACLBKW_16480)	-	3194164..3194583 (-)	420	WP_017357864.1	TIGR03826 family flagellar region protein	-
ACLBKW_RS16485 (ACLBKW_16485)	comFC	3194640..3195107 (-)	468	WP_039169829.1	ComF family protein	Machinery gene
ACLBKW_RS16490 (ACLBKW_16490)	-	3195159..3195362 (-)	204	Protein_3191	hypothetical protein	-
ACLBKW_RS16495 (ACLBKW_16495)	-	3195323..3195616 (-)	294	WP_035701582.1	late competence development ComFB family protein	-
ACLBKW_RS16500 (ACLBKW_16500)	comFA	3195681..3197060 (-)	1380	WP_414834791.1	DEAD/DEAH box helicase	Machinery gene
ACLBKW_RS16505 (ACLBKW_16505)	-	3197180..3198022 (-)	843	WP_414834474.1	DegV family protein	-
ACLBKW_RS16510 (ACLBKW_16510)	degU	3198234..3198923 (-)	690	WP_008348273.1	two-component system response regulator DegU	Regulator
ACLBKW_RS16515 (ACLBKW_16515)	degS	3198988..3200163 (-)	1176	WP_003213166.1	sensor histidine kinase	Regulator
ACLBKW_RS16520 (ACLBKW_16520)	-	3200385..3201053 (+)	669	WP_017357860.1	YigZ family protein	-
ACLBKW_RS16525 (ACLBKW_16525)	-	3201038..3202135 (+)	1098	Protein_3198	LCP family protein	-
ACLBKW_RS16535 (ACLBKW_16535)	-	3203612..3204679 (-)	1068	WP_007499956.1	glycosyltransferase family 4 protein	-

Sequence

Protein

• Length: 391 a.a.
• Molecular weight: 45523.25 Da
• Isoelectric Point: 5.8757

>NTDB_id=1094703 ACLBKW_RS16515 WP_003213166.1 3198988..3200163(-) (degS) [Bacillus altitudinis strain Ba]
MTTPKMDPKLLDSIIMKMLSTVDGSKDEVFRIGEQSRQQYESLVEELKQIKQQVNEVIDFGDKLEVHTRHARNRLSEVSR
NFNKFSEEEIREAYEKAHNLQVELTMIQQREKQLRERRDDLERRLLSLQDVIERSETLVSQITVVLNYLNQDLRQVGVLL
EDAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEEGFKEIRSLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLNTIEEYDGKTKITFQCLGDTESERIASQFEVALFRLAQEAVTNSLKHSEAEEISVKVEV
TKDFVTLIIKDDGKGFDMKDVKTNKNKSFGLLGMKERVDLLEGKMTIDSKIGLGTFIMIRVPLTLQNKIVK

Nucleotide

• Length: 1176 bp

>NTDB_id=1094703 ACLBKW_RS16515 WP_003213166.1 3198988..3200163(-) (degS) [Bacillus altitudinis strain Ba]
ATGACAACACCTAAAATGGATCCGAAGTTATTGGATTCAATCATCATGAAAATGCTAAGTACAGTTGATGGCAGTAAGGA
CGAAGTATTTAGAATCGGCGAACAGTCCCGTCAACAATATGAAAGCCTAGTAGAAGAGCTTAAGCAAATTAAACAGCAAG
TCAACGAAGTAATTGATTTTGGGGATAAACTAGAAGTACATACGAGACATGCTAGAAATCGTTTATCTGAAGTCAGCAGA
AACTTCAACAAATTCAGCGAAGAAGAAATACGAGAAGCCTATGAAAAAGCACATAACCTGCAAGTAGAATTGACCATGAT
CCAGCAGCGCGAAAAACAGCTGAGGGAAAGAAGAGATGATCTCGAAAGACGATTGTTAAGCTTACAAGACGTCATTGAAC
GTTCAGAAACGCTTGTGAGCCAGATCACGGTCGTCCTCAACTACTTGAACCAAGATTTACGTCAGGTCGGTGTTTTACTT
GAAGATGCTCAGGCAAAACAAGATTTTGGACTAAGAATTATTGAAGCCCAGGAAGAAGAGCGCAAAAGGGTATCACGAGA
AATCCATGATGGACCTGCTCAGATGCTGGCAAACGTGATGATGCGTTCAGAACTAATTGAACGAATTTTTAGAGACCGTG
GAACAGAAGAAGGATTTAAAGAAATTAGAAGTCTAAGACAGAATGTGCGAAATGCACTGTACGAAGTGAGAAGAATCATT
TATGATTTAAGACCGATGGCTTTAGATGATTTGGGTCTCATTCCGACACTGCGAAAATACTTAAACACAATTGAAGAATA
TGATGGAAAAACCAAAATTACGTTCCAGTGCTTAGGTGATACTGAAAGCGAAAGAATTGCTTCTCAATTTGAAGTGGCAC
TATTTAGACTAGCTCAAGAAGCTGTCACAAATTCTTTAAAGCATTCTGAAGCTGAAGAAATCTCTGTGAAGGTTGAAGTG
ACGAAAGACTTTGTCACCTTAATTATCAAAGACGATGGAAAAGGCTTTGATATGAAGGATGTTAAAACAAATAAAAACAA
ATCCTTTGGGTTACTTGGTATGAAAGAGCGCGTAGACTTACTAGAAGGTAAAATGACCATAGACTCAAAAATAGGTCTAG
GGACATTCATCATGATTAGAGTACCGTTAACATTACAAAATAAAATTGTAAAATAG

Domains

Predicted by InterproScan.

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	85.455	98.465	0.841