Detailed information
Bioinformatically predicted
Overview
| Name | pilO | Type | Machinery gene |
| Locus tag | ACMVO4_RS14140 | Genome accession | NZ_CP180205 |
| Coordinates | 3068126..3068713 (-) | Length | 195 a.a. |
| NCBI ID | WP_414931562.1 | Uniprot ID | - |
| Organism | Vibrio europaeus strain EX1 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3063126..3073713
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACMVO4_RS14120 (ACMVO4_14120) | aroB | 3064113..3065201 (-) | 1089 | WP_171383619.1 | 3-dehydroquinate synthase | - |
| ACMVO4_RS14125 (ACMVO4_14125) | aroK | 3065230..3065748 (-) | 519 | WP_069667329.1 | shikimate kinase AroK | - |
| ACMVO4_RS14130 (ACMVO4_14130) | pilQ | 3065925..3067619 (-) | 1695 | WP_414931560.1 | type IV pilus secretin PilQ | Machinery gene |
| ACMVO4_RS14135 (ACMVO4_14135) | pilP | 3067633..3068136 (-) | 504 | WP_414931561.1 | pilus assembly protein PilP | Machinery gene |
| ACMVO4_RS14140 (ACMVO4_14140) | pilO | 3068126..3068713 (-) | 588 | WP_414931562.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| ACMVO4_RS14145 (ACMVO4_14145) | pilN | 3068700..3069263 (-) | 564 | WP_171802179.1 | PilN domain-containing protein | Machinery gene |
| ACMVO4_RS14150 (ACMVO4_14150) | pilM | 3069253..3070248 (-) | 996 | WP_414931563.1 | type IV pilus assembly protein PilM | Machinery gene |
| ACMVO4_RS14155 (ACMVO4_14155) | - | 3070389..3072908 (+) | 2520 | WP_272279170.1 | penicillin-binding protein 1A | - |
Sequence
Protein
Download Length: 195 a.a. Molecular weight: 22555.96 Da Isoelectric Point: 7.5118
>NTDB_id=1094524 ACMVO4_RS14140 WP_414931562.1 3068126..3068713(-) (pilO) [Vibrio europaeus strain EX1]
MYRFNLDIEEIGEWPLTYQLVVMAVLMAILQGGGYWLFAQPKLGQLDLLKQQEQQHKTSIALKTKKVVLLPRIKAQLDEL
SQRYDYLSRQLPAQKELASMLASVNQVGLQNSLTFTRIDWGHKHNQAFLYKLPLNIELTGDYHDIGDFSAAIASLPRIIN
FDDVYWHRVSLESSTLHFRVRAYTYQLKGEVKDES
MYRFNLDIEEIGEWPLTYQLVVMAVLMAILQGGGYWLFAQPKLGQLDLLKQQEQQHKTSIALKTKKVVLLPRIKAQLDEL
SQRYDYLSRQLPAQKELASMLASVNQVGLQNSLTFTRIDWGHKHNQAFLYKLPLNIELTGDYHDIGDFSAAIASLPRIIN
FDDVYWHRVSLESSTLHFRVRAYTYQLKGEVKDES
Nucleotide
Download Length: 588 bp
>NTDB_id=1094524 ACMVO4_RS14140 WP_414931562.1 3068126..3068713(-) (pilO) [Vibrio europaeus strain EX1]
GTGTATCGCTTTAACCTTGATATTGAAGAGATAGGCGAGTGGCCACTTACTTATCAGCTAGTCGTGATGGCCGTGTTGAT
GGCGATTTTACAGGGAGGCGGTTATTGGTTATTTGCTCAGCCTAAGCTTGGACAACTCGATCTTCTTAAACAGCAAGAGC
AGCAGCACAAAACCTCAATAGCATTGAAAACGAAAAAAGTGGTGTTGTTACCTAGAATAAAGGCCCAGCTTGATGAACTG
TCACAGCGTTATGATTACCTATCGCGTCAATTGCCCGCGCAAAAAGAGCTTGCTTCTATGTTGGCGTCGGTTAATCAGGT
CGGCTTACAGAATTCCCTGACCTTTACCCGAATTGATTGGGGACACAAACACAACCAAGCGTTTCTATACAAGCTGCCAC
TCAACATTGAATTGACTGGCGATTATCACGATATCGGTGATTTTTCTGCAGCAATTGCCTCGCTACCGCGAATTATAAAT
TTTGATGATGTCTATTGGCATCGTGTCAGCTTAGAAAGCAGCACACTGCATTTTCGGGTCCGAGCTTACACCTATCAGCT
TAAAGGTGAGGTCAAAGATGAAAGTTAA
GTGTATCGCTTTAACCTTGATATTGAAGAGATAGGCGAGTGGCCACTTACTTATCAGCTAGTCGTGATGGCCGTGTTGAT
GGCGATTTTACAGGGAGGCGGTTATTGGTTATTTGCTCAGCCTAAGCTTGGACAACTCGATCTTCTTAAACAGCAAGAGC
AGCAGCACAAAACCTCAATAGCATTGAAAACGAAAAAAGTGGTGTTGTTACCTAGAATAAAGGCCCAGCTTGATGAACTG
TCACAGCGTTATGATTACCTATCGCGTCAATTGCCCGCGCAAAAAGAGCTTGCTTCTATGTTGGCGTCGGTTAATCAGGT
CGGCTTACAGAATTCCCTGACCTTTACCCGAATTGATTGGGGACACAAACACAACCAAGCGTTTCTATACAAGCTGCCAC
TCAACATTGAATTGACTGGCGATTATCACGATATCGGTGATTTTTCTGCAGCAATTGCCTCGCTACCGCGAATTATAAAT
TTTGATGATGTCTATTGGCATCGTGTCAGCTTAGAAAGCAGCACACTGCATTTTCGGGTCCGAGCTTACACCTATCAGCT
TAAAGGTGAGGTCAAAGATGAAAGTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilO | Vibrio cholerae strain A1552 |
67.368 |
97.436 |
0.656 |
| pilO | Vibrio campbellii strain DS40M4 |
59.239 |
94.359 |
0.559 |