Detailed information NTG1094526

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: ACMVO4_RS14150
• Genome accession: NZ_CP180205
• Coordinates: 3069253..3070248 (-)
• Length: 331 a.a.
• NCBI ID: WP_414931563.1
• Uniprot ID: -
• Organism: Vibrio europaeus strain EX1
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3064253..3075248

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACMVO4_RS14125 (ACMVO4_14125)	aroK	3065230..3065748 (-)	519	WP_069667329.1	shikimate kinase AroK	-
ACMVO4_RS14130 (ACMVO4_14130)	pilQ	3065925..3067619 (-)	1695	WP_414931560.1	type IV pilus secretin PilQ	Machinery gene
ACMVO4_RS14135 (ACMVO4_14135)	pilP	3067633..3068136 (-)	504	WP_414931561.1	pilus assembly protein PilP	Machinery gene
ACMVO4_RS14140 (ACMVO4_14140)	pilO	3068126..3068713 (-)	588	WP_414931562.1	type 4a pilus biogenesis protein PilO	Machinery gene
ACMVO4_RS14145 (ACMVO4_14145)	pilN	3068700..3069263 (-)	564	WP_171802179.1	PilN domain-containing protein	Machinery gene
ACMVO4_RS14150 (ACMVO4_14150)	pilM	3069253..3070248 (-)	996	WP_414931563.1	type IV pilus assembly protein PilM	Machinery gene
ACMVO4_RS14155 (ACMVO4_14155)	-	3070389..3072908 (+)	2520	WP_272279170.1	penicillin-binding protein 1A	-
ACMVO4_RS14160 (ACMVO4_14160)	oxyR	3072971..3073864 (-)	894	WP_069667323.1	DNA-binding transcriptional regulator OxyR	-
ACMVO4_RS14165 (ACMVO4_14165)	-	3074037..3074768 (+)	732	WP_414931564.1	glutathione peroxidase	-
ACMVO4_RS14170 (ACMVO4_14170)	-	3074840..3075187 (-)	348	WP_004743292.1	RidA family protein	-

Sequence

Protein

• Length: 331 a.a.
• Molecular weight: 36446.87 Da
• Isoelectric Point: 7.1051

>NTDB_id=1094526 ACMVO4_RS14150 WP_414931563.1 3069253..3070248(-) (pilM) [Vibrio europaeus strain EX1]
MGKSLVTGIEIGHHSIKAVVLKPNKGTFALVDYQELPIEAGIFSDNHMSNYQKIVKKLKELRKSLPRFSTKVALAIPDNA
VISKVLQIDSGLSDNEIEYAISDAFSHQTPFPIDDLYLDYVPLTSNGQSSPTHYQVYATKKELVAPRVEVFRSASFQPVV
VDLRAHALVHIWQLAARQQVKTDWLLIDVGFDHASLCMDLADKAPFCKEIVLAIHEKEADSNHRLSLAQSREGFSAELLD
KIQRNLQLIVSMHGKSVNGIWLSGVGAAMPVLANEISTRLAIECELLNPLTLFSTTSQQPSANLLASGHRFTSAAGIALR
ALTWLESRNAA

Nucleotide

• Length: 996 bp

>NTDB_id=1094526 ACMVO4_RS14150 WP_414931563.1 3069253..3070248(-) (pilM) [Vibrio europaeus strain EX1]
ATGGGTAAATCATTAGTTACAGGCATTGAAATTGGACACCACAGTATTAAAGCGGTGGTTCTCAAGCCAAACAAGGGCAC
ATTTGCTCTTGTCGACTATCAAGAATTGCCAATCGAAGCGGGCATTTTCTCTGATAACCATATGTCAAATTATCAGAAAA
TTGTAAAGAAACTCAAAGAACTAAGGAAGAGTTTGCCACGATTTAGTACGAAAGTTGCATTAGCGATACCAGATAATGCG
GTAATAAGTAAGGTATTACAGATAGATAGCGGGCTTAGCGACAATGAAATTGAGTACGCTATTTCCGATGCATTTTCCCA
TCAAACTCCGTTTCCAATTGACGATCTCTACTTAGATTATGTTCCCCTGACCAGTAATGGGCAGTCATCGCCAACTCACT
ACCAAGTATACGCGACGAAAAAAGAGCTAGTTGCCCCTAGAGTTGAAGTATTCAGAAGCGCTTCCTTTCAACCTGTAGTG
GTTGATTTACGTGCTCATGCTTTAGTGCATATTTGGCAGCTTGCTGCACGACAGCAGGTGAAAACCGATTGGCTTCTGAT
AGATGTTGGTTTTGACCACGCTTCGTTGTGTATGGACCTTGCTGATAAAGCGCCTTTTTGCAAAGAGATCGTTTTGGCAA
TCCATGAAAAAGAGGCGGATTCAAACCATCGCTTAAGCCTGGCGCAGAGCCGCGAAGGGTTCAGCGCCGAGTTACTAGAT
AAAATCCAACGCAATCTACAGCTTATTGTTTCTATGCACGGTAAGAGTGTTAACGGGATTTGGCTGTCAGGTGTTGGGGC
TGCCATGCCTGTTCTGGCGAATGAAATCAGCACGCGCCTTGCCATTGAATGTGAGCTTCTCAACCCGCTTACTCTTTTTT
CAACAACGAGCCAACAGCCATCCGCGAATCTGTTGGCTAGTGGGCATAGGTTCACATCGGCGGCTGGGATTGCTCTGCGC
GCGCTCACTTGGTTGGAGAGTCGCAATGCTGCATAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (8-195)

• Type IV pilus assembly protein PilM; (PilM_2) (234-321)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Vibrio cholerae strain A1552	51.765	100	0.532
pilM	Vibrio campbellii strain DS40M4	41.964	100	0.426