Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | ACMG4L_RS09045 | Genome accession | NZ_CP179933 |
| Coordinates | 1955766..1956296 (-) | Length | 176 a.a. |
| NCBI ID | WP_035249972.1 | Uniprot ID | A0A7G2S588 |
| Organism | Alcanivorax sp. IL1 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1950766..1961296
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACMG4L_RS09025 (ACMG4L_09025) | - | 1950835..1951845 (+) | 1011 | WP_272962182.1 | hypothetical protein | - |
| ACMG4L_RS09030 (ACMG4L_09030) | gspD | 1951957..1954017 (-) | 2061 | WP_232222137.1 | type II secretion system secretin GspD | - |
| ACMG4L_RS09035 (ACMG4L_09035) | gspC | 1954029..1954889 (-) | 861 | WP_035249975.1 | type II secretion system protein GspC | - |
| ACMG4L_RS09040 (ACMG4L_09040) | gspN | 1955029..1955757 (-) | 729 | WP_272974726.1 | type II secretion system protein N | - |
| ACMG4L_RS09045 (ACMG4L_09045) | ssb | 1955766..1956296 (-) | 531 | WP_035249972.1 | single-stranded DNA-binding protein | Machinery gene |
| ACMG4L_RS09050 (ACMG4L_09050) | - | 1956402..1957769 (-) | 1368 | WP_035249970.1 | MFS transporter | - |
| ACMG4L_RS09055 (ACMG4L_09055) | - | 1958009..1958659 (+) | 651 | WP_035249967.1 | response regulator transcription factor | - |
Sequence
Protein
Download Length: 176 a.a. Molecular weight: 19093.76 Da Isoelectric Point: 4.7884
>NTDB_id=1093983 ACMG4L_RS09045 WP_035249972.1 1955766..1956296(-) (ssb) [Alcanivorax sp. IL1]
MARGVNKVILIGNLGADPETRFMPSGGAVTNVRLATSETWKDKQSGQMQERTEWHRVVFFNKLGEIAGEYLKKGSKVYIE
GSIRTRKWQGQDGQDRYTTEIVANEMQMLDGRGDGGGGQGGGYAPQGNQGGYQNQNENYGGGSAAPQQNQNQNPGQNQNQ
GGFSGPADDFDDDIPF
MARGVNKVILIGNLGADPETRFMPSGGAVTNVRLATSETWKDKQSGQMQERTEWHRVVFFNKLGEIAGEYLKKGSKVYIE
GSIRTRKWQGQDGQDRYTTEIVANEMQMLDGRGDGGGGQGGGYAPQGNQGGYQNQNENYGGGSAAPQQNQNQNPGQNQNQ
GGFSGPADDFDDDIPF
Nucleotide
Download Length: 531 bp
>NTDB_id=1093983 ACMG4L_RS09045 WP_035249972.1 1955766..1956296(-) (ssb) [Alcanivorax sp. IL1]
ATGGCGCGCGGCGTTAACAAGGTAATTCTGATTGGTAACCTGGGGGCAGACCCGGAAACCCGTTTCATGCCCAGCGGTGG
CGCGGTCACCAATGTTCGTCTGGCTACCAGTGAAACCTGGAAGGACAAGCAGAGCGGGCAGATGCAGGAACGCACTGAAT
GGCACCGGGTGGTATTTTTCAACAAGCTGGGTGAAATTGCCGGTGAGTACCTGAAGAAGGGCTCCAAGGTCTATATCGAA
GGCTCCATTCGTACCCGCAAGTGGCAGGGGCAGGATGGTCAGGATCGCTACACTACCGAAATCGTGGCCAACGAAATGCA
GATGCTGGATGGCCGTGGTGACGGCGGCGGTGGCCAGGGTGGCGGCTATGCGCCTCAGGGTAACCAGGGTGGTTACCAGA
ACCAGAACGAGAATTACGGTGGCGGCAGTGCCGCGCCGCAGCAGAATCAGAACCAGAACCCCGGTCAGAATCAAAATCAG
GGCGGCTTCAGTGGCCCGGCAGATGATTTTGACGACGATATCCCGTTCTGA
ATGGCGCGCGGCGTTAACAAGGTAATTCTGATTGGTAACCTGGGGGCAGACCCGGAAACCCGTTTCATGCCCAGCGGTGG
CGCGGTCACCAATGTTCGTCTGGCTACCAGTGAAACCTGGAAGGACAAGCAGAGCGGGCAGATGCAGGAACGCACTGAAT
GGCACCGGGTGGTATTTTTCAACAAGCTGGGTGAAATTGCCGGTGAGTACCTGAAGAAGGGCTCCAAGGTCTATATCGAA
GGCTCCATTCGTACCCGCAAGTGGCAGGGGCAGGATGGTCAGGATCGCTACACTACCGAAATCGTGGCCAACGAAATGCA
GATGCTGGATGGCCGTGGTGACGGCGGCGGTGGCCAGGGTGGCGGCTATGCGCCTCAGGGTAACCAGGGTGGTTACCAGA
ACCAGAACGAGAATTACGGTGGCGGCAGTGCCGCGCCGCAGCAGAATCAGAACCAGAACCCCGGTCAGAATCAAAATCAG
GGCGGCTTCAGTGGCCCGGCAGATGATTTTGACGACGATATCCCGTTCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Vibrio cholerae strain A1552 |
55.191 |
100 |
0.574 |
| ssb | Glaesserella parasuis strain SC1401 |
53.804 |
100 |
0.562 |
| ssb | Neisseria meningitidis MC58 |
48.023 |
100 |
0.483 |
| ssb | Neisseria gonorrhoeae MS11 |
47.458 |
100 |
0.477 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
35.754 |
100 |
0.364 |