Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | ACLZ8E_RS03515 | Genome accession | NZ_CP178726 |
| Coordinates | 778571..779038 (+) | Length | 155 a.a. |
| NCBI ID | WP_064600181.1 | Uniprot ID | - |
| Organism | Staphylococcus epidermidis strain 13.4-1 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 773571..784038
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACLZ8E_RS03475 (ACLZ8E_03475) | - | 773742..773951 (+) | 210 | WP_049367120.1 | hypothetical protein | - |
| ACLZ8E_RS03480 (ACLZ8E_03480) | - | 773967..774113 (+) | 147 | WP_002502039.1 | hypothetical protein | - |
| ACLZ8E_RS03485 (ACLZ8E_03485) | - | 774110..774391 (-) | 282 | WP_002502040.1 | hypothetical protein | - |
| ACLZ8E_RS03490 (ACLZ8E_03490) | - | 774481..774672 (+) | 192 | WP_002502041.1 | DUF1270 family protein | - |
| ACLZ8E_RS03495 (ACLZ8E_03495) | - | 774732..774995 (+) | 264 | WP_002502042.1 | hypothetical protein | - |
| ACLZ8E_RS03500 (ACLZ8E_03500) | - | 774998..776947 (+) | 1950 | WP_064600172.1 | AAA family ATPase | - |
| ACLZ8E_RS03505 (ACLZ8E_03505) | - | 776949..777872 (+) | 924 | WP_064600175.1 | recombinase RecT | - |
| ACLZ8E_RS03510 (ACLZ8E_03510) | - | 777941..778570 (+) | 630 | WP_264080663.1 | MBL fold metallo-hydrolase | - |
| ACLZ8E_RS03515 (ACLZ8E_03515) | ssbA | 778571..779038 (+) | 468 | WP_064600181.1 | single-stranded DNA-binding protein | Machinery gene |
| ACLZ8E_RS03520 (ACLZ8E_03520) | - | 779061..780026 (+) | 966 | WP_064600183.1 | DnaD domain-containing protein | - |
| ACLZ8E_RS03525 (ACLZ8E_03525) | - | 780045..780260 (+) | 216 | WP_064600186.1 | DUF3269 family protein | - |
| ACLZ8E_RS03530 (ACLZ8E_03530) | - | 780315..780821 (+) | 507 | WP_064600190.1 | dUTPase | - |
| ACLZ8E_RS03535 (ACLZ8E_03535) | - | 780787..780942 (+) | 156 | WP_154803512.1 | hypothetical protein | - |
| ACLZ8E_RS03540 (ACLZ8E_03540) | - | 780993..781295 (-) | 303 | WP_064600193.1 | DUF4870 domain-containing protein | - |
| ACLZ8E_RS03545 (ACLZ8E_03545) | rinB | 781400..781576 (+) | 177 | WP_002499244.1 | transcriptional activator RinB | - |
| ACLZ8E_RS03550 (ACLZ8E_03550) | - | 781584..781733 (+) | 150 | WP_151507108.1 | DUF1514 domain-containing protein | - |
| ACLZ8E_RS03555 (ACLZ8E_03555) | - | 781750..782196 (+) | 447 | WP_064600198.1 | transcriptional regulator | - |
| ACLZ8E_RS03560 (ACLZ8E_03560) | - | 782780..783130 (+) | 351 | WP_017464444.1 | HNH endonuclease | - |
| ACLZ8E_RS03565 (ACLZ8E_03565) | - | 783290..783775 (+) | 486 | WP_002502056.1 | phage terminase small subunit P27 family | - |
Sequence
Protein
Download Length: 155 a.a. Molecular weight: 17360.13 Da Isoelectric Point: 7.0155
>NTDB_id=1091012 ACLZ8E_RS03515 WP_064600181.1 778571..779038(+) (ssbA) [Staphylococcus epidermidis strain 13.4-1]
MINRVVLVGRLTKDPEFRTTQSGIDVATFTLAVNRNFTNAQGEREADFINIIVFRKQAHNVNNYLSKGKLAGVDGRIQSR
SYENQEGRRVFVTEVVADSVQFLEPKNTQQGGQQDAYQQQTQSQTQRGQNTKPQGQNPFANANGPIDISDDDLPF
MINRVVLVGRLTKDPEFRTTQSGIDVATFTLAVNRNFTNAQGEREADFINIIVFRKQAHNVNNYLSKGKLAGVDGRIQSR
SYENQEGRRVFVTEVVADSVQFLEPKNTQQGGQQDAYQQQTQSQTQRGQNTKPQGQNPFANANGPIDISDDDLPF
Nucleotide
Download Length: 468 bp
>NTDB_id=1091012 ACLZ8E_RS03515 WP_064600181.1 778571..779038(+) (ssbA) [Staphylococcus epidermidis strain 13.4-1]
ATGATTAACAGAGTCGTATTAGTAGGTCGTTTAACTAAAGATCCTGAATTTAGAACAACTCAAAGTGGAATTGATGTTGC
AACTTTCACACTAGCAGTTAATCGTAATTTCACAAACGCACAGGGCGAACGTGAAGCAGATTTTATCAATATTATCGTAT
TTAGAAAACAAGCACACAATGTTAACAACTACTTATCGAAAGGAAAATTAGCAGGCGTTGATGGTCGAATTCAATCACGC
AGTTATGAAAATCAAGAAGGTCGTCGAGTATTTGTAACTGAAGTAGTTGCAGATAGCGTTCAATTTCTTGAACCTAAAAA
CACACAACAAGGTGGTCAACAAGACGCTTACCAGCAACAAACTCAATCACAAACACAACGTGGCCAAAATACTAAACCAC
AAGGACAAAATCCTTTCGCAAATGCTAATGGACCGATTGATATCAGTGATGATGATTTACCATTTTAA
ATGATTAACAGAGTCGTATTAGTAGGTCGTTTAACTAAAGATCCTGAATTTAGAACAACTCAAAGTGGAATTGATGTTGC
AACTTTCACACTAGCAGTTAATCGTAATTTCACAAACGCACAGGGCGAACGTGAAGCAGATTTTATCAATATTATCGTAT
TTAGAAAACAAGCACACAATGTTAACAACTACTTATCGAAAGGAAAATTAGCAGGCGTTGATGGTCGAATTCAATCACGC
AGTTATGAAAATCAAGAAGGTCGTCGAGTATTTGTAACTGAAGTAGTTGCAGATAGCGTTCAATTTCTTGAACCTAAAAA
CACACAACAAGGTGGTCAACAAGACGCTTACCAGCAACAAACTCAATCACAAACACAACGTGGCCAAAATACTAAACCAC
AAGGACAAAATCCTTTCGCAAATGCTAATGGACCGATTGATATCAGTGATGATGATTTACCATTTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
59.302 |
100 |
0.658 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
52.353 |
100 |
0.574 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
60.377 |
68.387 |
0.413 |
| ssb | Glaesserella parasuis strain SC1401 |
32.402 |
100 |
0.374 |
| ssb | Vibrio cholerae strain A1552 |
31.111 |
100 |
0.361 |