Detailed information NTG1089058

Bioinformatically predicted

Overview

• Name: pilY2
• Type: Machinery gene
• Locus tag: ACKWDP_RS17725
• Genome accession: NZ_CP178354
• Coordinates: 3639390..3639872 (-)
• Length: 160 a.a.
• NCBI ID: WP_001046489.1
• Uniprot ID: A0A0J0ZLV7
• Organism: Acinetobacter baumannii strain A297
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3634390..3644872

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACKWDP_RS17690 (ACKWDP_17690)	-	3634501..3635532 (+)	1032	WP_001189459.1	lipase secretion chaperone	-
ACKWDP_RS17695 (ACKWDP_17695)	-	3635647..3636588 (+)	942	WP_085916958.1	lipase family alpha/beta hydrolase	-
ACKWDP_RS17700 (ACKWDP_17700)	rplS	3636640..3637008 (-)	369	WP_000014562.1	50S ribosomal protein L19	-
ACKWDP_RS17705 (ACKWDP_17705)	trmD	3637216..3637956 (-)	741	WP_000464595.1	tRNA (guanosine(37)-N1)-methyltransferase TrmD	-
ACKWDP_RS17710 (ACKWDP_17710)	rimM	3638002..3638550 (-)	549	WP_000189236.1	ribosome maturation factor RimM	-
ACKWDP_RS17715 (ACKWDP_17715)	rpsP	3638570..3638821 (-)	252	WP_000260334.1	30S ribosomal protein S16	-
ACKWDP_RS17720 (ACKWDP_17720)	pilE	3638968..3639393 (-)	426	WP_000788336.1	type IV pilin protein	Machinery gene
ACKWDP_RS17725 (ACKWDP_17725)	pilY2	3639390..3639872 (-)	483	WP_001046489.1	type IV pilin protein	Machinery gene
ACKWDP_RS17730 (ACKWDP_17730)	pilY1	3639883..3643737 (-)	3855	WP_000768943.1	vWA domain-containing protein	Machinery gene
ACKWDP_RS17735 (ACKWDP_17735)	pilX	3643749..3644567 (-)	819	WP_000149374.1	PilX N-terminal domain-containing pilus assembly protein	Machinery gene

Sequence

Protein

• Length: 160 a.a.
• Molecular weight: 17657.94 Da
• Isoelectric Point: 8.4737

>NTDB_id=1089058 ACKWDP_RS17725 WP_001046489.1 3639390..3639872(-) (pilY2) [Acinetobacter baumannii strain A297]
MNKYYILRFNQGFTLIELMVVIVIVAIFASIAIPSYQSYSRRATASAAKSEILKLAEQLEQHKSRNFTYRGFTTTSITLP
RGGYTIQITDDTTTGNLLTNAAANGQTWVIKATTTDSRNFNFIAKNSGIRCQSLTVTAVDNDCGGTTTCNTCETNSEVWQ

Nucleotide

• Length: 483 bp

>NTDB_id=1089058 ACKWDP_RS17725 WP_001046489.1 3639390..3639872(-) (pilY2) [Acinetobacter baumannii strain A297]
ATGAATAAGTACTACATTTTACGGTTCAATCAGGGTTTTACCTTGATTGAGCTTATGGTCGTGATTGTTATCGTTGCTAT
TTTTGCTTCAATTGCTATCCCTTCATATCAAAGTTATAGCCGTAGAGCTACTGCATCTGCGGCTAAAAGTGAAATTTTGA
AATTAGCTGAACAATTAGAACAGCATAAATCAAGAAATTTTACTTATAGGGGTTTTACCACAACCTCTATAACCCTACCT
CGCGGGGGATATACGATTCAAATTACTGATGATACGACCACAGGAAATTTATTGACGAATGCTGCTGCAAATGGGCAAAC
ATGGGTCATTAAAGCAACCACAACAGATTCGAGAAATTTTAATTTTATTGCTAAAAATTCAGGTATACGTTGTCAAAGTT
TAACAGTTACAGCCGTTGATAATGATTGTGGTGGTACGACTACTTGTAATACATGTGAAACGAACAGTGAGGTTTGGCAG
TGA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (10-32)

• Type IV minor pilin ComP, DNA uptake sequence receptor (ComP_DUS) (34-115)

3D structure

• AlphaFold DB: A0A0J0ZLV7

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilY2	Acinetobacter baumannii D1279779	96.25	100	0.963
comE	Acinetobacter baylyi ADP1	41.86	100	0.45