Detailed information
Bioinformatically predicted
Overview
| Name | pilE | Type | Machinery gene |
| Locus tag | ACKWDP_RS17720 | Genome accession | NZ_CP178354 |
| Coordinates | 3638968..3639393 (-) | Length | 141 a.a. |
| NCBI ID | WP_000788336.1 | Uniprot ID | A0A0J0ZME6 |
| Organism | Acinetobacter baumannii strain A297 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3633968..3644393
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACKWDP_RS17690 (ACKWDP_17690) | - | 3634501..3635532 (+) | 1032 | WP_001189459.1 | lipase secretion chaperone | - |
| ACKWDP_RS17695 (ACKWDP_17695) | - | 3635647..3636588 (+) | 942 | WP_085916958.1 | lipase family alpha/beta hydrolase | - |
| ACKWDP_RS17700 (ACKWDP_17700) | rplS | 3636640..3637008 (-) | 369 | WP_000014562.1 | 50S ribosomal protein L19 | - |
| ACKWDP_RS17705 (ACKWDP_17705) | trmD | 3637216..3637956 (-) | 741 | WP_000464595.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| ACKWDP_RS17710 (ACKWDP_17710) | rimM | 3638002..3638550 (-) | 549 | WP_000189236.1 | ribosome maturation factor RimM | - |
| ACKWDP_RS17715 (ACKWDP_17715) | rpsP | 3638570..3638821 (-) | 252 | WP_000260334.1 | 30S ribosomal protein S16 | - |
| ACKWDP_RS17720 (ACKWDP_17720) | pilE | 3638968..3639393 (-) | 426 | WP_000788336.1 | type IV pilin protein | Machinery gene |
| ACKWDP_RS17725 (ACKWDP_17725) | pilY2 | 3639390..3639872 (-) | 483 | WP_001046489.1 | type IV pilin protein | Machinery gene |
| ACKWDP_RS17730 (ACKWDP_17730) | pilY1 | 3639883..3643737 (-) | 3855 | WP_000768943.1 | vWA domain-containing protein | Machinery gene |
Sequence
Protein
Download Length: 141 a.a. Molecular weight: 15175.41 Da Isoelectric Point: 7.8144
>NTDB_id=1089057 ACKWDP_RS17720 WP_000788336.1 3638968..3639393(-) (pilE) [Acinetobacter baumannii strain A297]
MKNGFSLIEIMVVVAIVAILAAIATPSYLQYLRKGHRTAVQSEMMNIAQTLESQKIVNNRYPSDATIQSIYGSNVSPIQG
QALYKLAFATLNDSTWVLTAIPISTSSQAGDGIICLNDQGQKFWAKGATVCALSASSSWTE
MKNGFSLIEIMVVVAIVAILAAIATPSYLQYLRKGHRTAVQSEMMNIAQTLESQKIVNNRYPSDATIQSIYGSNVSPIQG
QALYKLAFATLNDSTWVLTAIPISTSSQAGDGIICLNDQGQKFWAKGATVCALSASSSWTE
Nucleotide
Download Length: 426 bp
>NTDB_id=1089057 ACKWDP_RS17720 WP_000788336.1 3638968..3639393(-) (pilE) [Acinetobacter baumannii strain A297]
GTGAAGAATGGTTTTTCTTTAATTGAAATTATGGTCGTGGTAGCAATAGTTGCAATTTTAGCGGCTATAGCCACCCCTTC
ATATTTACAATATTTGCGTAAAGGACATCGTACTGCTGTTCAATCCGAAATGATGAATATTGCGCAGACTTTAGAGTCTC
AAAAAATAGTAAATAACCGTTATCCTTCGGATGCAACTATACAATCAATTTATGGTTCTAATGTGAGTCCTATACAAGGT
CAGGCTCTATATAAGTTAGCTTTTGCAACTCTAAATGATTCAACTTGGGTACTTACTGCAATACCTATTTCTACTAGCTC
ACAAGCAGGTGATGGAATTATTTGTTTAAATGACCAAGGGCAAAAATTTTGGGCAAAGGGTGCCACAGTTTGTGCACTAT
CTGCTTCATCGAGTTGGACCGAGTAA
GTGAAGAATGGTTTTTCTTTAATTGAAATTATGGTCGTGGTAGCAATAGTTGCAATTTTAGCGGCTATAGCCACCCCTTC
ATATTTACAATATTTGCGTAAAGGACATCGTACTGCTGTTCAATCCGAAATGATGAATATTGCGCAGACTTTAGAGTCTC
AAAAAATAGTAAATAACCGTTATCCTTCGGATGCAACTATACAATCAATTTATGGTTCTAATGTGAGTCCTATACAAGGT
CAGGCTCTATATAAGTTAGCTTTTGCAACTCTAAATGATTCAACTTGGGTACTTACTGCAATACCTATTTCTACTAGCTC
ACAAGCAGGTGATGGAATTATTTGTTTAAATGACCAAGGGCAAAAATTTTGGGCAAAGGGTGCCACAGTTTGTGCACTAT
CTGCTTCATCGAGTTGGACCGAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilE | Acinetobacter baumannii D1279779 |
90.071 |
100 |
0.901 |
| comF | Acinetobacter baylyi ADP1 |
49.286 |
99.291 |
0.489 |