Detailed information NTG1088543

Bioinformatically predicted

Overview

• Name: comEC
• Type: Machinery gene
• Locus tag: ACLFAM_RS03150
• Genome accession: NZ_CP178226
• Coordinates: 657610..659820 (-)
• Length: 736 a.a.
• NCBI ID: WP_039115828.1
• Uniprot ID: -
• Organism: Lactococcus lactis strain L-WY410
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 652610..664820

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACLFAM_RS03120 (ACLFAM_03120)	atpA	652652..654154 (-)	1503	WP_004255265.1	F0F1 ATP synthase subunit alpha	-
ACLFAM_RS03125 (ACLFAM_03125)	-	654341..654868 (-)	528	WP_012898339.1	F0F1 ATP synthase subunit delta	-
ACLFAM_RS03130 (ACLFAM_03130)	atpF	654870..655376 (-)	507	WP_010906128.1	F0F1 ATP synthase subunit B	-
ACLFAM_RS03135 (ACLFAM_03135)	atpB	655391..656104 (-)	714	WP_004255255.1	F0F1 ATP synthase subunit A	-
ACLFAM_RS03140 (ACLFAM_03140)	-	656149..656364 (-)	216	WP_004255250.1	F0F1 ATP synthase subunit C	-
ACLFAM_RS03145 (ACLFAM_03145)	-	656549..657325 (-)	777	WP_039115826.1	alpha/beta hydrolase	-
ACLFAM_RS03150 (ACLFAM_03150)	comEC	657610..659820 (-)	2211	WP_039115828.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
ACLFAM_RS03155 (ACLFAM_03155)	comEA	659801..660448 (-)	648	WP_010906131.1	ComEA family DNA-binding protein	Machinery gene
ACLFAM_RS03160 (ACLFAM_03160)	-	660508..661869 (-)	1362	WP_039115830.1	ABC transporter permease	-
ACLFAM_RS03165 (ACLFAM_03165)	-	661866..662798 (-)	933	WP_004255238.1	ABC transporter ATP-binding protein	-
ACLFAM_RS03170 (ACLFAM_03170)	-	662903..663247 (-)	345	WP_259747958.1	hypothetical protein	-
ACLFAM_RS03175 (ACLFAM_03175)	-	663405..663968 (-)	564	WP_004255233.1	GNAT family N-acetyltransferase	-

Sequence

Protein

• Length: 736 a.a.
• Molecular weight: 84558.14 Da
• Isoelectric Point: 9.6385

>NTDB_id=1088543 ACLFAM_RS03150 WP_039115828.1 657610..659820(-) (comEC) [Lactococcus lactis strain L-WY410]
MSCVLNKIPLIFLAYLSVILYFLIFNFNLLCLILFIFSSLLASYRKYYLVIPFLLVMGSFFLVVKMDTIKNSENQPTTLS
KITMIPDTIQVNGDLLSFQGKERDQNYQVYETLKSKKEQKFYQNLSQNCQLSFTGNLQIPEKQRNFNGFDNQKYLASQDI
YRQITIDKINKIVLNDTFDLRVLRRKAIVWSQTHFPKPMNDYMTGLLFGFLSKDFNQIGDIYSSLGIIHLFALSGMQVNF
FIDWFRRIILRLGITREKLNIWQIPFSIFYAFMTGFSVSVLRALFQKNIRLNPLDNLAVTTFLLMIVSPKFLLTTGGQLT
LFYAFVISMINHKFSELKGIRKLLTESSVISLSILPLLILDFHIFQPFSILLTIGFGFLFDVILLPLLLGTFLLSLIGYN
FNINHIFQILEWLIHEVDLPLHYPLVLGNPRPIELLILFFLIGLLIDNLFKKRRQIIFAGLIVCSFFICKNPIYPSITAV
DIGQGDSIFLQDKFNKETILIDTGGRLALPQESWQKPQSQTNAEKTLIPYLESVGVSQIDQLILTHTDADHVGDFLNLAD
KIKIKEIWVSPGELTNNHFVEKLKKANIAIHISKVGDKIPIFDSALQVLSNGYTGKGDNNDSIVTYGNFYHTKFLFTGDL
EQEGEKELLKNYPKLKVDVLKVGHHGSKTSSNSDFIKEINPKLALISVGEKNRYGHPNQETLETLKKNQIRILRTDQKGA
LKLMQINQQWRIQTVR

Nucleotide

• Length: 2211 bp

>NTDB_id=1088543 ACLFAM_RS03150 WP_039115828.1 657610..659820(-) (comEC) [Lactococcus lactis strain L-WY410]
ATGAGTTGTGTTTTGAATAAAATTCCTTTGATATTTTTAGCTTATCTTTCTGTTATCTTGTATTTTTTAATCTTCAATTT
TAATTTACTTTGTCTCATTTTGTTCATTTTTTCAAGTTTACTTGCCTCATATAGAAAATATTATTTAGTCATCCCATTTT
TATTAGTTATGGGAAGTTTTTTCTTAGTAGTAAAAATGGATACGATTAAGAATAGTGAAAATCAGCCAACCACTCTTTCC
AAAATTACAATGATCCCCGACACTATCCAAGTTAATGGTGATTTACTAAGTTTTCAAGGAAAAGAAAGAGACCAAAATTA
TCAAGTTTACGAGACTCTAAAAAGTAAAAAAGAACAAAAATTTTATCAAAATCTAAGTCAAAATTGTCAGCTGAGTTTCA
CAGGAAACCTTCAAATTCCAGAAAAACAAAGAAATTTTAATGGATTCGATAATCAAAAGTATTTAGCGAGCCAGGATATT
TATCGGCAAATTACGATTGATAAAATTAATAAAATAGTTTTAAACGACACTTTTGACCTCCGTGTTTTAAGACGAAAAGC
AATTGTCTGGTCACAAACTCATTTTCCAAAGCCAATGAATGATTATATGACTGGCTTACTTTTTGGCTTTTTAAGTAAAG
ATTTTAATCAAATAGGAGACATTTACAGTTCATTAGGAATTATTCATCTTTTTGCCTTATCGGGAATGCAAGTTAATTTT
TTCATTGATTGGTTTCGTAGAATTATTCTTCGACTAGGAATAACGAGAGAAAAATTAAATATTTGGCAAATTCCCTTTTC
AATTTTTTATGCATTTATGACAGGATTTTCGGTTTCAGTATTACGAGCTTTATTTCAAAAAAATATTCGTCTAAATCCTT
TAGATAACCTAGCAGTGACAACCTTTCTTCTGATGATTGTCAGTCCTAAATTTTTACTGACAACAGGAGGACAACTAACT
TTATTTTATGCTTTTGTCATTTCAATGATTAATCATAAATTTTCAGAACTAAAAGGAATAAGAAAATTACTGACAGAATC
ATCAGTGATTTCTTTGAGTATTTTACCTTTACTCATTTTGGATTTTCATATCTTTCAGCCTTTTTCAATTTTACTGACGA
TTGGCTTTGGCTTTTTATTTGATGTAATCTTATTGCCTTTACTATTAGGAACTTTTCTCTTGTCTCTAATTGGCTATAAT
TTTAATATAAATCATATTTTTCAAATTCTAGAATGGCTAATTCATGAGGTTGATTTACCCTTACATTATCCTTTGGTTTT
AGGGAATCCCCGGCCAATTGAATTATTAATCTTATTTTTCCTAATCGGTTTGTTAATTGATAATCTCTTTAAGAAAAGAA
GACAAATAATTTTTGCTGGCCTAATTGTTTGTAGTTTTTTTATTTGTAAAAATCCAATTTACCCCAGTATCACAGCAGTT
GATATTGGTCAAGGAGATAGTATTTTTTTGCAAGATAAATTTAATAAAGAAACAATTTTGATTGATACAGGCGGACGATT
AGCCCTTCCGCAAGAAAGTTGGCAAAAACCTCAAAGTCAAACAAATGCCGAAAAAACACTCATTCCATATCTTGAATCTG
TTGGAGTAAGTCAAATCGACCAGCTCATTTTGACGCATACGGACGCTGACCATGTTGGAGATTTTTTGAATTTAGCTGAT
AAAATAAAAATAAAAGAAATTTGGGTTAGCCCCGGTGAACTGACAAATAATCATTTTGTAGAAAAATTGAAGAAAGCAAA
TATTGCGATTCACATCAGTAAAGTTGGAGATAAAATTCCAATCTTTGATAGTGCTTTACAAGTTTTATCAAATGGTTATA
CAGGAAAAGGGGATAATAATGATTCTATCGTGACTTATGGAAATTTTTATCATACAAAATTTCTATTTACAGGGGATTTA
GAACAAGAAGGAGAAAAAGAACTGCTCAAGAATTATCCTAAATTGAAAGTTGATGTCTTAAAAGTAGGTCATCATGGCAG
TAAAACAAGTTCAAACTCTGACTTTATTAAAGAAATTAATCCCAAACTTGCCCTCATTTCGGTTGGAGAGAAAAATCGAT
ATGGACATCCCAATCAAGAAACTTTAGAAACATTAAAAAAAAACCAAATCAGAATACTGAGAACCGATCAAAAGGGAGCG
CTTAAACTAATGCAAATCAATCAACAGTGGCGAATCCAAACAGTTAGATAA

Domains

Predicted by InterproScan.

• Competence protein (Competence) (206-446)

• Domain of unknown function (DUF4131) (DUF4131) (28-171)

• Metallo-beta-lactamase superfamily (Lactamase_B) (483-689)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEC	Lactococcus lactis subsp. cremoris KW2	76.359	100	0.764
comEC/celB	Streptococcus mitis SK321	44.758	100	0.452
comEC/celB	Streptococcus mitis NCTC 12261	44.549	100	0.45
comEC/celB	Streptococcus pneumoniae TIGR4	43.548	100	0.44
comEC/celB	Streptococcus pneumoniae Rx1	43.145	100	0.436
comEC/celB	Streptococcus pneumoniae D39	43.145	100	0.436
comEC/celB	Streptococcus pneumoniae R6	43.145	100	0.436