Detailed information    

insolico Bioinformatically predicted

Overview


Name   htrA   Type   Regulator
Locus tag   ACKKE8_RS22505 Genome accession   NZ_CP176370
Coordinates   4541212..4541490 (+) Length   92 a.a.
NCBI ID   WP_173618497.1    Uniprot ID   -
Organism   Brevibacillus fortis strain LJQJ21     
Function   repress competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 4536212..4546490
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACKKE8_RS22480 (ACKKE8_22480) - 4536761..4537294 (-) 534 WP_047071910.1 PadR family transcriptional regulator -
  ACKKE8_RS22485 (ACKKE8_22485) - 4537744..4537947 (+) 204 Protein_4338 trypsin-like peptidase domain-containing protein -
  ACKKE8_RS22490 (ACKKE8_22490) - 4538012..4539106 (-) 1095 WP_409174969.1 YheC/YheD family protein -
  ACKKE8_RS22495 (ACKKE8_22495) - 4539305..4539625 (+) 321 WP_017250460.1 helix-turn-helix domain-containing protein -
  ACKKE8_RS22500 (ACKKE8_22500) - 4539738..4541189 (+) 1452 WP_409174970.1 recombinase family protein -
  ACKKE8_RS22505 (ACKKE8_22505) htrA 4541212..4541490 (+) 279 WP_173618497.1 S1C family serine protease Regulator
  ACKKE8_RS22510 (ACKKE8_22510) - 4541521..4541667 (-) 147 WP_017250462.1 hypothetical protein -
  ACKKE8_RS22515 (ACKKE8_22515) - 4541731..4542012 (-) 282 WP_016742090.1 DUF2325 domain-containing protein -
  ACKKE8_RS22520 (ACKKE8_22520) - 4542342..4542941 (+) 600 WP_409174971.1 IMEF encapsulin system ferritin-like cargo protein -
  ACKKE8_RS22525 (ACKKE8_22525) - 4542979..4543827 (+) 849 WP_007721249.1 family 1 encapsulin nanocompartment shell protein -
  ACKKE8_RS22530 (ACKKE8_22530) - 4543970..4544788 (+) 819 WP_409174972.1 alpha/beta fold hydrolase -
  ACKKE8_RS22535 (ACKKE8_22535) - 4544844..4546052 (-) 1209 WP_409174973.1 PLP-dependent aminotransferase family protein -

Sequence


Protein


Download         Length: 92 a.a.        Molecular weight: 9813.34 Da        Isoelectric Point: 6.1950

>NTDB_id=1079811 ACKKE8_RS22505 WP_173618497.1 4541212..4541490(+) (htrA) [Brevibacillus fortis strain LJQJ21]
MATVGSPLGLENSVTAGIISAKNRRLQVAKRMYEEIFQTDAAINPGNSGGPLINLNGEVVGLNAFIIQSSQCLGFAIGID
ALKMQLEQYVFK

Nucleotide


Download         Length: 279 bp        

>NTDB_id=1079811 ACKKE8_RS22505 WP_173618497.1 4541212..4541490(+) (htrA) [Brevibacillus fortis strain LJQJ21]
ATGGCGACAGTTGGTTCCCCACTTGGTTTGGAAAATTCTGTGACAGCGGGAATCATCAGTGCCAAAAACCGCCGCTTACA
GGTTGCGAAGCGAATGTACGAAGAAATTTTTCAGACGGATGCTGCCATTAACCCAGGAAATAGCGGAGGTCCACTCATTA
ATTTGAATGGGGAAGTCGTTGGTCTCAATGCATTCATCATTCAATCCAGCCAATGCTTGGGCTTCGCCATCGGAATTGAC
GCCCTCAAAATGCAACTGGAGCAATACGTATTCAAGTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus mitis NCTC 12261

46.465

100

0.5

  htrA Streptococcus pneumoniae Rx1

46.465

100

0.5

  htrA Streptococcus pneumoniae D39

46.465

100

0.5

  htrA Streptococcus pneumoniae R6

46.465

100

0.5

  htrA Streptococcus pneumoniae TIGR4

46.465

100

0.5

  htrA Streptococcus mutans UA159

47.191

96.739

0.457

  htrA Streptococcus gordonii str. Challis substr. CH1

43.678

94.565

0.413


Multiple sequence alignment