Detailed information NTG1077412

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: ACJJVB_RS29055
• Genome accession: NZ_CP174502
• Coordinates: 6503138..6504202 (-)
• Length: 354 a.a.
• NCBI ID: WP_009613650.1
• Uniprot ID: A0A1A5D9E0
• Organism: Pseudomonas citronellolis strain ISHS.CFo
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 6498138..6509202

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACJJVB_RS29030 (ACJJVB_29030)	aroK	6498694..6499212 (-)	519	WP_024128057.1	shikimate kinase AroK	-
ACJJVB_RS29035 (ACJJVB_29035)	pilQ	6499221..6501308 (-)	2088	WP_043313184.1	type IV pilus secretin PilQ	Machinery gene
ACJJVB_RS29040 (ACJJVB_29040)	pilP	6501365..6501889 (-)	525	WP_043313182.1	type 4a pilus biogenesis lipoprotein PilP	-
ACJJVB_RS29045 (ACJJVB_29045)	pilO	6501886..6502542 (-)	657	WP_009613645.1	type 4a pilus biogenesis protein PilO	-
ACJJVB_RS29050 (ACJJVB_29050)	pilN	6502539..6503138 (-)	600	WP_009613648.1	type 4a pilus biogenesis protein PilN	-
ACJJVB_RS29055 (ACJJVB_29055)	pilM	6503138..6504202 (-)	1065	WP_009613650.1	pilus assembly protein PilM	Machinery gene
ACJJVB_RS29060 (ACJJVB_29060)	-	6504388..6506820 (+)	2433	WP_043313181.1	penicillin-binding protein 1A	-
ACJJVB_RS29065 (ACJJVB_29065)	-	6507314..6507805 (-)	492	WP_043313179.1	M48 family metallopeptidase	-
ACJJVB_RS29070 (ACJJVB_29070)	-	6507867..6508637 (-)	771	WP_043313177.1	class I SAM-dependent methyltransferase	-
ACJJVB_RS29075 (ACJJVB_29075)	-	6508680..6509102 (-)	423	WP_043313176.1	hypothetical protein	-

Sequence

Protein

• Length: 354 a.a.
• Molecular weight: 37773.09 Da
• Isoelectric Point: 4.4526

>NTDB_id=1077412 ACJJVB_RS29055 WP_009613650.1 6503138..6504202(-) (pilM) [Pseudomonas citronellolis strain ISHS.CFo]
MLGLFTKKANTLLGIDISSTSVKLLELSRSGGRYKVEAYAVEPLPPNSVVEKNIAELEGVGQALSRVVAKARTGVKTAAV
AVAGSAVITKTIEMDGGLSEDELENQLKIEADQYIPYPLEEVAIDFEVQGVSARNAERVDVLLAACRKENVEVREAALAL
AGLTAKVVDVEAYALERAFGLLGDQLGGNADELTVAVVDIGATMTTLSVLHHGRTIYTREQLFGGRQLTEEIQRRYGLSV
EEAGLAKKQGGLPDDYDSEVLQPFKDAVVQQVSRSLQFFFAAGQFNDVDYILLAGGTASIPDLDRLIQQKIGTPTLVANP
FADMVLSNKVNAGALASDAPALMIACGLAMRSFD

Nucleotide

• Length: 1065 bp

>NTDB_id=1077412 ACJJVB_RS29055 WP_009613650.1 6503138..6504202(-) (pilM) [Pseudomonas citronellolis strain ISHS.CFo]
GTGCTAGGGCTCTTCACTAAGAAAGCGAACACACTGCTGGGGATCGACATCAGTTCGACTTCGGTCAAACTCCTCGAGTT
GAGCCGTTCGGGCGGGCGCTACAAGGTAGAGGCCTACGCCGTAGAGCCGCTCCCGCCGAACTCGGTAGTCGAGAAGAACA
TCGCCGAACTGGAGGGGGTCGGCCAGGCGCTGTCGCGGGTGGTCGCCAAGGCGCGCACCGGCGTGAAGACGGCTGCCGTG
GCGGTCGCCGGCTCGGCGGTCATCACCAAGACCATCGAGATGGACGGCGGGCTTTCCGAAGACGAGCTGGAGAACCAGCT
CAAGATCGAAGCCGACCAGTACATTCCCTATCCCCTGGAGGAAGTCGCCATCGACTTCGAGGTCCAGGGCGTATCCGCGC
GCAACGCCGAGCGCGTCGACGTGCTGCTGGCGGCCTGCCGCAAGGAGAACGTCGAGGTGCGCGAGGCCGCGCTGGCCCTG
GCCGGGCTCACCGCCAAGGTGGTGGACGTCGAGGCCTACGCGCTGGAGCGCGCCTTCGGCCTGCTCGGCGACCAGCTGGG
CGGCAACGCCGACGAGCTGACCGTCGCGGTGGTCGACATCGGCGCCACCATGACCACCCTCAGCGTCTTGCACCACGGCC
GCACCATCTATACCCGCGAACAGCTGTTCGGCGGGCGCCAGCTCACCGAGGAGATCCAGCGCCGCTATGGCCTGTCGGTG
GAAGAAGCCGGCCTCGCCAAGAAGCAGGGCGGTCTTCCGGATGACTACGACAGCGAAGTGCTGCAACCGTTCAAGGATGC
GGTGGTGCAGCAGGTCTCGCGTTCGCTGCAGTTCTTCTTCGCCGCTGGCCAGTTCAACGACGTCGACTACATCCTGCTCG
CCGGCGGCACGGCTTCCATTCCCGACCTGGACCGGCTCATCCAGCAGAAGATCGGCACCCCGACGCTGGTGGCCAACCCC
TTCGCCGACATGGTGCTGAGCAACAAGGTGAATGCCGGGGCGCTGGCCAGTGATGCGCCGGCGCTGATGATTGCCTGCGG
TCTGGCGATGAGGAGTTTCGACTGA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-353)

3D structure

• AlphaFold DB: A0A1A5D9E0

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	57.345	100	0.573
comM	Acinetobacter nosocomialis M2	57.345	100	0.573
comM	Acinetobacter baylyi ADP1	53.39	100	0.534
pilM	Legionella pneumophila strain ERS1305867	46.045	100	0.46