Detailed information    

insolico Bioinformatically predicted

Overview


Name   htrA   Type   Regulator
Locus tag   ACI3ES_RS00510 Genome accession   NZ_CP174386
Coordinates   96045..97175 (+) Length   376 a.a.
NCBI ID   WP_114667433.1    Uniprot ID   A0A9X3E5Z5
Organism   Leuconostoc falkenbergense strain SAEED 24451     
Function   repress competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 91045..102175
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACI3ES_RS00490 yycF 91173..91880 (+) 708 WP_004911084.1 response regulator YycF -
  ACI3ES_RS00495 walK 91946..93811 (+) 1866 WP_036066468.1 cell wall metabolism sensor histidine kinase WalK -
  ACI3ES_RS00500 - 93801..95099 (+) 1299 WP_114667431.1 hypothetical protein -
  ACI3ES_RS00505 yycI 95211..95981 (+) 771 WP_242029708.1 two-component system regulatory protein YycI -
  ACI3ES_RS00510 htrA 96045..97175 (+) 1131 WP_114667433.1 S1C family serine protease Regulator
  ACI3ES_RS00515 rlmH 97805..98284 (+) 480 WP_114667434.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  ACI3ES_RS00520 - 98332..99015 (-) 684 WP_080518948.1 NAD(P)H-hydrate epimerase -
  ACI3ES_RS00525 - 99074..99895 (-) 822 WP_114667435.1 serine hydrolase -
  ACI3ES_RS00530 alr 100289..101401 (+) 1113 WP_114667436.1 alanine racemase -

Sequence


Protein


Download         Length: 376 a.a.        Molecular weight: 39048.38 Da        Isoelectric Point: 9.7544

>NTDB_id=1077011 ACI3ES_RS00510 WP_114667433.1 96045..97175(+) (htrA) [Leuconostoc falkenbergense strain SAEED 24451]
MAQSTLTKTVLTGVIAGLVGGGVILYAQEGLEKSTTQTVRTTATKTSSISKNATATTAYNKVSDAVVSVLNFSKSGQNYE
ESSEGSGVIYKKSDQSAFIVTNNHVIDGAAKIQVMLHNGKKVTATLVGKDAMTDLAVLKIASDNVTTTAEFGDSSKIAVG
ENVLAIGSPLGSEYASSVTQGIISAKKRLVEATSENGQNYGGSTVIQTDAAINPGNSGGPLINFAGQVIGINSMKLSTSS
SGTSVEGMGFAIPSDQVVDVVNKLVKDGKITRPAIGIGLVNLSEVTADDQKSTLKIPDSVTGGVVVMSLTKKGPADNAGL
KKYDVIVGIDGKKVTTQADLREVLYKHKLGDTITLTYYHHSNKKTVKVKLTQKLAS

Nucleotide


Download         Length: 1131 bp        

>NTDB_id=1077011 ACI3ES_RS00510 WP_114667433.1 96045..97175(+) (htrA) [Leuconostoc falkenbergense strain SAEED 24451]
ATGGCACAATCAACATTAACAAAAACAGTGTTAACTGGCGTCATTGCAGGTTTAGTCGGCGGAGGCGTTATTTTATACGC
GCAAGAGGGGCTTGAAAAAAGTACCACACAAACAGTACGCACAACGGCAACCAAAACGTCGTCGATTTCTAAAAATGCAA
CTGCTACGACAGCTTATAATAAAGTTTCAGATGCGGTCGTGTCTGTGTTGAATTTTAGTAAATCGGGACAGAATTATGAA
GAATCGTCTGAGGGATCTGGTGTCATTTACAAAAAATCAGATCAATCGGCGTTTATTGTGACAAATAATCATGTCATTGA
CGGTGCAGCTAAAATTCAAGTGATGCTCCACAATGGGAAAAAAGTGACTGCCACTTTGGTTGGTAAAGATGCTATGACTG
ACTTAGCGGTTCTAAAGATTGCAAGTGACAATGTGACGACAACAGCTGAGTTTGGTGATTCCAGTAAAATAGCGGTTGGA
GAAAATGTGTTAGCGATTGGCTCTCCTTTGGGCTCAGAGTATGCCTCTTCAGTTACACAAGGCATTATTTCTGCTAAAAA
ACGACTCGTTGAAGCGACTTCTGAAAATGGTCAAAATTATGGTGGCTCGACTGTTATTCAAACGGATGCCGCGATTAATC
CAGGTAATTCTGGTGGTCCGTTGATTAATTTTGCCGGACAAGTGATTGGCATTAATTCAATGAAATTATCTACTTCGTCA
TCAGGTACTAGTGTTGAGGGAATGGGATTTGCGATTCCTTCAGATCAAGTGGTAGATGTTGTCAATAAGTTGGTCAAGGA
CGGCAAAATTACACGGCCAGCCATAGGCATTGGTTTAGTTAATTTGTCAGAAGTGACTGCTGACGATCAAAAGTCTACAC
TCAAAATTCCCGATAGTGTCACAGGCGGTGTTGTGGTCATGAGTTTGACGAAAAAAGGACCGGCTGACAATGCTGGTTTG
AAAAAGTATGATGTGATTGTAGGTATCGATGGCAAGAAAGTGACGACACAAGCCGATCTGCGTGAAGTCCTATACAAACA
CAAATTAGGTGATACGATCACATTGACATACTACCACCACAGTAATAAGAAAACTGTTAAAGTTAAATTAACCCAAAAAT
TAGCAAGCTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus mitis NCTC 12261

52.557

93.617

0.492

  htrA Streptococcus pneumoniae Rx1

52.77

91.223

0.481

  htrA Streptococcus pneumoniae D39

52.77

91.223

0.481

  htrA Streptococcus pneumoniae R6

52.77

91.223

0.481

  htrA Streptococcus pneumoniae TIGR4

52.77

91.223

0.481

  htrA Streptococcus mutans UA159

52.941

90.426

0.479

  htrA Streptococcus gordonii str. Challis substr. CH1

46.597

100

0.473


Multiple sequence alignment