Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilE   Type   Machinery gene
Locus tag   NELON_RS01750 Genome accession   NZ_CP007726
Coordinates   345829..346359 (-) Length   176 a.a.
NCBI ID   WP_040665936.1    Uniprot ID   A0A0B5CFG5
Organism   Neisseria elongata subsp. glycolytica ATCC 29315     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 340829..351359
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NELON_RS01725 (NELON_01815) mlaD 341352..341852 (-) 501 WP_003772450.1 outer membrane lipid asymmetry maintenance protein MlaD -
  NELON_RS01730 (NELON_01820) mlaE 341884..342660 (-) 777 WP_003772451.1 lipid asymmetry maintenance ABC transporter permease subunit MlaE -
  NELON_RS01735 (NELON_01825) - 342723..343523 (-) 801 WP_003772452.1 ABC transporter ATP-binding protein -
  NELON_RS01740 (NELON_01830) apbC 343812..344891 (+) 1080 WP_041961261.1 iron-sulfur cluster carrier protein ApbC -
  NELON_RS01745 (NELON_01835) - 345008..345799 (-) 792 WP_003772456.1 hypothetical protein -
  NELON_RS01750 (NELON_01840) pilE 345829..346359 (-) 531 WP_040665936.1 pilin Machinery gene
  NELON_RS01755 (NELON_01845) pilE 346430..346996 (-) 567 WP_003772458.1 pilin Machinery gene
  NELON_RS01760 (NELON_01850) - 347582..348679 (-) 1098 WP_003772463.1 NnrS family protein -
  NELON_RS01765 (NELON_01855) - 348975..349589 (-) 615 WP_003772465.1 CadD family cadmium resistance transporter -
  NELON_RS01770 (NELON_01860) - 349900..350592 (-) 693 WP_174428826.1 ATP-binding cassette domain-containing protein -

Sequence

Protein


Download         Length: 176 a.a.        Molecular weight: 18496.22 Da        Isoelectric Point: 8.4538

>NTDB_id=107673 NELON_RS01750 WP_040665936.1 345829..346359(-) (pilE) [Neisseria elongata subsp. glycolytica ATCC 29315]
MNSLPNQQGFTLIELMIVIAIIGILAAIAIPQYSIYTTRAKLSEGLVAASHRKTAVTEAYLNNGMAGVTALASSTNTAPT
ADKQSKFIKSSNIDAATGAIVILLADDEESTLPDDAKGKTLVFKPYIGNADLPTAVSRGKMDWACASATNTTATKRGFTN
MPQGTLPSKYAPPECK

Nucleotide


Download         Length: 531 bp        

>NTDB_id=107673 NELON_RS01750 WP_040665936.1 345829..346359(-) (pilE) [Neisseria elongata subsp. glycolytica ATCC 29315]
ATGAATAGCCTGCCCAATCAACAAGGTTTCACCTTGATAGAACTGATGATCGTGATTGCCATTATCGGTATTTTAGCCGC
AATCGCCATACCTCAATATTCAATCTATACCACCCGTGCAAAATTGAGTGAGGGACTAGTTGCCGCTTCTCATCGAAAAA
CCGCGGTTACGGAAGCATACCTGAACAACGGGATGGCCGGTGTCACTGCTCTTGCCAGCAGTACCAATACGGCACCAACT
GCAGACAAACAAAGTAAATTTATAAAAAGCAGCAATATCGATGCCGCAACCGGTGCGATTGTTATTTTGCTGGCTGACGA
TGAAGAGTCAACCCTACCTGACGATGCCAAAGGCAAAACTCTGGTTTTTAAACCCTATATCGGAAATGCGGATTTACCTA
CAGCCGTATCCAGAGGAAAAATGGACTGGGCATGCGCCTCGGCAACCAACACCACTGCAACCAAACGCGGATTTACAAAT
ATGCCGCAAGGTACTCTGCCGTCGAAATATGCCCCTCCGGAATGCAAATAA

Domains

Predicted by InterProScan.

Pilin (bacterial filament) (Pilin)

(38-176)

Prokaryotic N-terminal methylation motif (N_methyl)

(5-29)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0B5CFG5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilE Neisseria elongata subsp. glycolytica ATCC 29315

45.405

100

0.477
  comP Acinetobacter baylyi ADP1

37.714

99.432

0.375
  pilA2 Legionella pneumophila strain ERS1305867

37.791

97.727

0.369
  pilA2 Legionella pneumophila str. Paris

37.791

97.727

0.369

Multiple sequence alignment