Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   ACCH06_RS15905 Genome accession   NZ_CP174157
Coordinates   3185481..3187787 (-) Length   768 a.a.
NCBI ID   WP_406589206.1    Uniprot ID   -
Organism   Bacillus atrophaeus strain SHZ-24     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 3180481..3192787
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACCH06_RS15865 - 3180952..3181383 (+) 432 WP_003327161.1 Na(+)/H(+) antiporter subunit B -
  ACCH06_RS15870 - 3181383..3181724 (+) 342 WP_003327160.1 Na(+)/H(+) antiporter subunit C -
  ACCH06_RS15875 - 3181717..3183198 (+) 1482 WP_406589205.1 Na+/H+ antiporter subunit D -
  ACCH06_RS15880 - 3183204..3183680 (+) 477 WP_094232698.1 Na+/H+ antiporter subunit E -
  ACCH06_RS15885 - 3183680..3183964 (+) 285 WP_094232699.1 Na(+)/H(+) antiporter subunit F1 -
  ACCH06_RS15890 mnhG 3183948..3184322 (+) 375 WP_061570550.1 monovalent cation/H(+) antiporter subunit G -
  ACCH06_RS15895 - 3184361..3184741 (-) 381 WP_199679676.1 hotdog fold thioesterase -
  ACCH06_RS15900 comA 3184759..3185400 (-) 642 WP_003327154.1 response regulator transcription factor Regulator
  ACCH06_RS15905 comP 3185481..3187787 (-) 2307 WP_406589206.1 two-component system sensor histidine kinase ComP Regulator
  ACCH06_RS15910 comX 3187801..3187968 (-) 168 WP_106033957.1 competence pheromone ComX Regulator
  ACCH06_RS15915 comQ 3187952..3188854 (-) 903 WP_106034023.1 polyprenyl synthetase family protein Regulator
  ACCH06_RS15920 degQ 3189039..3189182 (-) 144 WP_003327149.1 degradation enzyme regulation protein DegQ Regulator
  ACCH06_RS15925 - 3189642..3190001 (+) 360 WP_343310885.1 hypothetical protein -
  ACCH06_RS15930 - 3190020..3191252 (-) 1233 WP_406589207.1 EAL and HDOD domain-containing protein -

Sequence


Protein


Download         Length: 768 a.a.        Molecular weight: 88829.30 Da        Isoelectric Point: 8.1825

>NTDB_id=1074700 ACCH06_RS15905 WP_406589206.1 3185481..3187787(-) (comP) [Bacillus atrophaeus strain SHZ-24]
MKNLIKKFTIAVIVLSVLYVCYIAYINMNGIIIGTKVDKNNKNQLVIEEISESSYGQFVGLRQGDTILKINEGKPTEKHT
KWGYLSHINSLDIIRNGKIIHLEDFDLVTLNRPYSFFLFVLPLVFYFLSIICIFYILKVSKIRKSFAGYILILLLLDISI
AYISAGGPFRGHRINRYINLFTFISSPILYLQFIQGYLKEIGKTFLNSLISFLYIIPILNIVIEFIGYNQVNYDILANIN
LVSFAALTLFAFISIYFHLNKYKYSEHSFILKLLILTNTLSFAPFLIFYVLPIILTGNYIFPALASASLLVLIPFGLVYQ
FVANKLFDIEFILGRMRYYALLAIIPTLFIVGALVWFDLVKIQMNPARQTVFIFVVMFAVFYFKEVIDFKFRLKRFSEKF
NYQDSIFKYTQLMRSVTSFQQVFKELKNSILEVLLVSKAHTFEVASDNKVIYLDKQEIEPEWHLYQKEFENVTSEIGKII
EVNQGFLMKVGERGGSSYVLLCLSNINTPRLTRDEISWLKTLSFYTSVSMENVMQIEELMDHLKDLKQEGTNPIWLKKLM
FAIEEKQRSDLARDLHDSVLQDLISLKRQCELFLADFKKEDPCKNEVQDKLVQMNQQMSDVILMTRETCHELRPQLLYDL
GLVKALSKLVAQQQESAPFHIRLNTGRFTASLDLDSQLNLYRIIQEFLSNAMKHSQAGEVLIMLISFQNKIVLHYEDDGV
GFDKEKLNEQSMSMGLSGIKERVRALDGHLRIDTSVGNGLRADIEMEL

Nucleotide


Download         Length: 2307 bp        

>NTDB_id=1074700 ACCH06_RS15905 WP_406589206.1 3185481..3187787(-) (comP) [Bacillus atrophaeus strain SHZ-24]
TTGAAGAACTTGATAAAAAAATTCACAATAGCTGTAATTGTTTTAAGTGTTCTCTATGTTTGCTATATAGCATATATCAA
TATGAATGGTATTATAATTGGCACTAAGGTTGATAAAAATAATAAAAATCAACTTGTAATTGAAGAAATTTCGGAGTCTT
CTTATGGACAATTTGTTGGTCTCAGACAGGGAGATACCATTTTAAAAATTAATGAAGGAAAACCAACAGAAAAGCATACA
AAATGGGGCTATTTGAGTCACATTAACAGTTTGGATATTATAAGAAATGGAAAAATAATTCATCTTGAAGATTTTGATTT
AGTTACTTTAAATAGACCGTATAGTTTCTTTCTGTTCGTACTTCCTTTGGTTTTTTATTTTTTAAGTATAATCTGCATTT
TTTATATACTTAAGGTAAGTAAGATAAGAAAATCATTTGCTGGGTATATTCTTATTTTGTTGTTGTTAGACATTTCAATA
GCATATATAAGTGCAGGTGGGCCATTTAGGGGACATAGAATAAATAGATATATAAATTTGTTTACTTTCATATCCTCTCC
TATTCTTTATCTTCAGTTTATTCAAGGATATCTTAAAGAAATAGGAAAAACCTTTTTGAATAGTTTAATCTCTTTTCTCT
ATATCATACCAATATTGAATATTGTGATTGAGTTTATAGGCTATAATCAAGTTAATTATGACATTTTAGCGAATATTAAC
TTAGTTTCTTTTGCAGCCTTAACTCTATTTGCTTTTATATCTATATACTTTCATCTGAATAAATATAAATATTCTGAGCA
TTCATTTATTCTTAAACTATTAATTCTAACAAATACACTTTCATTTGCGCCATTTTTGATATTTTATGTTCTCCCGATTA
TACTCACAGGGAATTATATTTTCCCGGCATTAGCTTCGGCGTCATTGCTCGTACTTATCCCGTTCGGATTAGTGTATCAA
TTTGTTGCCAATAAACTGTTTGATATAGAATTTATTTTAGGAAGAATGAGATATTATGCTCTCCTTGCTATCATACCGAC
TCTATTCATAGTTGGGGCATTAGTGTGGTTTGATTTAGTGAAAATACAGATGAATCCTGCACGCCAAACTGTATTTATTT
TCGTTGTCATGTTCGCTGTCTTTTATTTTAAAGAGGTTATAGATTTTAAATTTCGATTAAAACGTTTCTCTGAAAAATTC
AATTATCAGGACAGTATTTTTAAATACACTCAGCTAATGAGGAGCGTAACTTCTTTTCAACAAGTCTTTAAAGAACTGAA
AAATTCAATTTTAGAAGTTTTACTCGTAAGCAAAGCCCATACCTTTGAAGTTGCTTCTGACAACAAAGTGATATATTTAG
ATAAGCAGGAAATTGAACCGGAGTGGCACCTTTATCAAAAGGAATTTGAGAACGTAACATCAGAAATTGGGAAAATTATC
GAAGTTAATCAAGGCTTTCTCATGAAAGTTGGTGAACGAGGCGGAAGTTCTTATGTTCTGCTTTGTTTGTCCAACATTAA
CACCCCTAGACTGACCCGTGATGAAATCTCATGGCTGAAGACATTGTCTTTTTACACTAGTGTATCAATGGAAAATGTCA
TGCAGATTGAAGAACTGATGGATCACCTGAAAGATTTAAAGCAAGAGGGAACGAATCCAATATGGCTGAAAAAGCTGATG
TTCGCCATCGAAGAAAAACAACGATCCGACCTGGCGCGTGACCTCCATGACTCCGTTCTTCAGGATTTGATCTCCTTAAA
ACGGCAATGCGAGCTGTTTCTTGCTGATTTTAAGAAGGAAGATCCTTGTAAGAATGAGGTGCAGGACAAGCTGGTGCAAA
TGAATCAGCAGATGTCTGATGTGATTTTGATGACGAGGGAGACGTGCCATGAATTGCGGCCGCAGCTCTTGTATGATTTG
GGATTGGTAAAGGCGCTGTCAAAGCTTGTTGCGCAGCAGCAGGAAAGCGCGCCGTTTCATATTCGGCTGAATACGGGAAG
GTTTACGGCATCGCTCGATCTTGATTCTCAGCTGAATTTGTACCGGATTATTCAAGAGTTTTTATCAAATGCCATGAAGC
ATTCCCAAGCCGGCGAGGTGCTGATTATGCTGATCAGTTTTCAAAATAAAATCGTTCTTCATTATGAGGATGACGGCGTT
GGCTTTGATAAGGAAAAATTGAATGAACAATCGATGAGTATGGGGCTTTCGGGCATTAAAGAGCGGGTTCGTGCGTTAGA
CGGGCACCTTCGGATCGATACAAGCGTAGGAAATGGATTGCGAGCCGATATTGAAATGGAATTGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

86.234

100

0.865


Multiple sequence alignment