Detailed information    

insolico Bioinformatically predicted

Overview


Name   htrA   Type   Regulator
Locus tag   ACI5FU_RS00665 Genome accession   NZ_CP173687
Coordinates   131665..132804 (+) Length   379 a.a.
NCBI ID   WP_405465495.1    Uniprot ID   -
Organism   Leuconostoc mesenteroides strain DMLM18     
Function   repress competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 126665..137804
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACI5FU_RS00645 (ACI5FU_00645) yycF 126822..127529 (+) 708 WP_010281559.1 response regulator YycF -
  ACI5FU_RS00650 (ACI5FU_00650) walK 127597..129462 (+) 1866 WP_025268546.1 cell wall metabolism sensor histidine kinase WalK -
  ACI5FU_RS00655 (ACI5FU_00655) - 129452..130744 (+) 1293 WP_135400183.1 hypothetical protein -
  ACI5FU_RS00660 (ACI5FU_00660) yycI 130801..131604 (+) 804 WP_010289058.1 two-component system regulatory protein YycI -
  ACI5FU_RS00665 (ACI5FU_00665) htrA 131665..132804 (+) 1140 WP_405465495.1 S1C family serine protease Regulator
  ACI5FU_RS00670 (ACI5FU_00670) rlmH 133435..133914 (+) 480 WP_096638766.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  ACI5FU_RS00675 (ACI5FU_00675) - 134008..136173 (+) 2166 WP_216988418.1 YhgE/Pip domain-containing protein -
  ACI5FU_RS00680 (ACI5FU_00680) - 136227..136679 (+) 453 WP_011680485.1 Rrf2 family transcriptional regulator -
  ACI5FU_RS00685 (ACI5FU_00685) - 136764..137429 (-) 666 WP_010285559.1 NAD(P)H-hydrate epimerase -

Sequence


Protein


Download         Length: 379 a.a.        Molecular weight: 39238.49 Da        Isoelectric Point: 9.7856

>NTDB_id=1073666 ACI5FU_RS00665 WP_405465495.1 131665..132804(+) (htrA) [Leuconostoc mesenteroides strain DMLM18]
MVQSALTKTLLTGVIAGVVGGGAILYGQQGVQLLQNQNQKVSTTATSTRTIAKNATATSAYNKVSDAVVSVLNFTKSSQG
SYQESSEGSGVIYKKTDGSAFIVTNNHVITGAAKIQVMLHSGKKVTATLVGKDAMTDLAVLKIDGTDVTTTAQFGDSSKI
TVGENVLAIGSPLGSEYASSVTQGIISAKKRLVEATSENGQNYGGSTVIQTDAAINPGNSGGPLINFAGQVIGINSMKLS
TSSSGTSVEGMGFAIPSDQVVDIVNKLVKDGKVTRPAIGISLINLSEVTASEQKSTLKIPDSVTGGVVVMSLTNNGPADK
AGLKKYDVIVGINGKKVSSQADLREELYKHSLGDTITLTYYHQDTKQTVKVKLTQKLAS

Nucleotide


Download         Length: 1140 bp        

>NTDB_id=1073666 ACI5FU_RS00665 WP_405465495.1 131665..132804(+) (htrA) [Leuconostoc mesenteroides strain DMLM18]
ATGGTACAATCAGCATTAACAAAAACGTTGTTAACTGGCGTCATTGCTGGTGTTGTTGGTGGAGGAGCAATTTTGTATGG
GCAGCAGGGTGTACAATTATTACAAAATCAAAATCAAAAAGTGAGTACGACAGCAACAAGTACAAGAACGATTGCCAAGA
ATGCAACTGCTACATCAGCTTATAATAAGGTATCAGATGCAGTTGTATCTGTATTGAACTTTACTAAATCCAGTCAAGGT
AGTTATCAAGAATCGTCAGAAGGTTCTGGCGTAATCTATAAAAAAACGGATGGATCGGCATTTATTGTAACGAATAATCA
CGTAATCACTGGAGCGGCTAAAATTCAAGTTATGCTGCACAGTGGGAAGAAAGTGACCGCTACATTAGTCGGCAAAGATG
CGATGACTGACTTAGCTGTTCTGAAAATCGACGGCACAGATGTTACAACAACTGCACAATTTGGCGATTCAAGTAAAATA
ACTGTTGGTGAAAACGTCTTGGCAATTGGTTCGCCGCTGGGATCTGAGTATGCTTCGTCAGTGACGCAAGGCATCATTTC
GGCCAAGAAAAGGTTAGTTGAGGCAACATCTGAAAATGGTCAAAATTATGGTGGATCCACGGTTATTCAGACGGATGCTG
CTATTAATCCTGGTAACTCAGGTGGACCATTAATCAACTTTGCAGGACAAGTTATTGGTATTAACTCAATGAAGTTATCA
ACATCTTCTTCTGGAACGAGCGTTGAGGGGATGGGTTTTGCAATTCCTTCTGATCAAGTCGTTGACATTGTTAACAAATT
AGTCAAAGATGGTAAAGTCACACGACCAGCAATTGGCATTAGTTTGATTAATTTGTCAGAAGTAACAGCTTCTGAGCAAA
AATCAACATTGAAAATTCCAGATAGCGTTACTGGTGGTGTTGTTGTAATGAGTTTGACTAACAATGGCCCAGCAGATAAA
GCTGGATTGAAGAAGTACGACGTTATTGTTGGCATTAATGGTAAAAAGGTCAGCTCACAGGCTGATCTGCGAGAAGAACT
CTACAAGCATTCGCTTGGGGACACAATAACATTGACTTATTATCATCAGGATACTAAGCAAACCGTTAAGGTTAAATTAA
CACAGAAATTAGCAAGCTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus mitis NCTC 12261

52.394

93.668

0.491

  htrA Streptococcus gordonii str. Challis substr. CH1

48.549

100

0.485

  htrA Streptococcus pneumoniae D39

52.924

90.237

0.478

  htrA Streptococcus pneumoniae TIGR4

52.924

90.237

0.478

  htrA Streptococcus pneumoniae R6

52.924

90.237

0.478

  htrA Streptococcus pneumoniae Rx1

52.924

90.237

0.478

  htrA Streptococcus mutans UA159

52.647

89.71

0.472


Multiple sequence alignment