Detailed information NTG1073163

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: ACI514_RS26435
• Genome accession: NZ_CP173611
• Coordinates: 5966164..5967657 (-)
• Length: 497 a.a.
• NCBI ID: WP_405122666.1
• Uniprot ID: -
• Organism: Pseudomonas sp. M20
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 5961164..5972657

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACI514_RS26420 (ACI514_26405)	-	5961652..5962572 (+)	921	WP_160059903.1	LysR substrate-binding domain-containing protein	-
ACI514_RS26425 (ACI514_26410)	-	5962757..5964733 (+)	1977	WP_405122664.1	methyl-accepting chemotaxis protein	-
ACI514_RS26430 (ACI514_26415)	-	5964953..5966167 (+)	1215	WP_405122665.1	aldose 1-epimerase family protein	-
ACI514_RS26435 (ACI514_26420)	comM	5966164..5967657 (-)	1494	WP_405122666.1	YifB family Mg chelatase-like AAA ATPase	Machinery gene
ACI514_RS26440 (ACI514_26425)	-	5967805..5968002 (-)	198	WP_160059876.1	hypothetical protein	-
ACI514_RS26445 (ACI514_26430)	-	5968207..5968476 (+)	270	WP_160059875.1	HigA family addiction module antitoxin	-
ACI514_RS26450 (ACI514_26435)	-	5968471..5968998 (-)	528	WP_160059874.1	Bro-N domain-containing protein	-
ACI514_RS26455 (ACI514_26440)	-	5969358..5969618 (-)	261	WP_007920416.1	accessory factor UbiK family protein	-
ACI514_RS26460 (ACI514_26445)	glnK	5970033..5970371 (+)	339	WP_002555808.1	P-II family nitrogen regulator	-
ACI514_RS26465 (ACI514_26450)	-	5970410..5971747 (+)	1338	WP_034152035.1	ammonium transporter	-
ACI514_RS26470 (ACI514_26455)	-	5971963..5972388 (+)	426	WP_095049349.1	secondary thiamine-phosphate synthase enzyme YjbQ	-

Sequence

Protein

• Length: 497 a.a.
• Molecular weight: 52910.06 Da
• Isoelectric Point: 8.0488

>NTDB_id=1073163 ACI514_RS26435 WP_405122666.1 5966164..5967657(-) (comM) [Pseudomonas sp. M20]
MSLSIVHSRAQIGVEAPAVTVEVHLANGLPSLTMVGLPEAAVKESKDRVRSAIINSGLQFPARRITLNLAPADLPKDGGR
FDLAIALGILSASVQVPCLTLDDVECLGELALSGAVRAVRGVLPAALAARKAGRALVVPRANAEEACLASGLKVFAVDHL
LEAVAHFNGHTPVEPYVSDGLMHASKPYPDLNEVQGQVAAKRALLIAAAGAHNLLFSGPPGTGKTLLASRLPGLLPPLAE
SEALEVAAIQSVASGAPLTHWPQRPFRQPHHSASGPALVGGSSKPQPGEITLAHHGVLFLDELPEFDRKVLEVLREPLES
GHIVISRAKDRVRFPARFQLVAAMNPCPCGYLGEPSGKCSCTPDMVQRYRNKLSGPLLDRIDLHLTVAREATALNPQVKP
GEDSASAAALVAEARERQQKRQGCANAFLDLPGLKRHCKLSTVDEAWLESACERLTLSLRSAHRLLKVARTLADLEQVDA
IKREHLAEALQYRPATP

Nucleotide

• Length: 1494 bp

>NTDB_id=1073163 ACI514_RS26435 WP_405122666.1 5966164..5967657(-) (comM) [Pseudomonas sp. M20]
ATGTCCCTCTCCATCGTCCACAGTCGCGCCCAGATAGGCGTGGAAGCCCCCGCTGTCACCGTCGAAGTCCATCTGGCCAA
CGGTCTGCCGTCGCTGACCATGGTCGGCCTGCCCGAGGCGGCGGTGAAGGAGAGCAAGGATCGGGTGCGCAGTGCGATCA
TCAACTCCGGGCTGCAGTTTCCGGCGCGGCGGATCACCTTGAATCTGGCGCCGGCAGATTTGCCCAAGGATGGCGGGCGG
TTTGATCTGGCGATTGCCCTGGGGATTCTGTCGGCGAGTGTGCAGGTGCCGTGTCTGACGCTGGATGATGTGGAATGTCT
GGGTGAGTTGGCGTTGTCCGGCGCAGTACGAGCGGTGCGTGGCGTGTTGCCGGCAGCGTTGGCGGCGCGCAAGGCGGGTC
GTGCGTTGGTGGTGCCGCGGGCGAATGCCGAGGAGGCGTGTCTGGCCTCGGGGTTGAAGGTGTTTGCGGTGGATCATTTG
CTGGAGGCGGTGGCGCATTTCAATGGGCATACGCCGGTTGAACCTTATGTCTCCGACGGGCTGATGCATGCCAGCAAGCC
TTATCCCGACTTGAATGAAGTGCAGGGGCAAGTGGCGGCGAAACGGGCGTTGCTGATTGCTGCTGCGGGCGCCCATAACT
TGCTGTTCAGCGGGCCGCCTGGGACGGGTAAGACATTGTTGGCGAGTCGCCTGCCGGGGCTGTTGCCGCCGCTGGCCGAG
AGTGAAGCACTGGAGGTGGCGGCGATCCAGTCAGTCGCCAGTGGCGCACCGCTGACCCATTGGCCGCAGCGCCCATTCCG
TCAACCGCACCACTCCGCATCCGGGCCGGCACTGGTCGGTGGCAGTTCAAAACCGCAACCCGGTGAGATTACCCTCGCCC
ACCATGGCGTGCTGTTTCTCGATGAGTTGCCAGAATTTGATCGCAAGGTATTGGAGGTTTTACGCGAGCCTTTGGAGTCG
GGTCATATCGTGATTTCCCGAGCCAAGGATCGCGTACGTTTTCCGGCACGCTTCCAGTTGGTCGCAGCGATGAATCCCTG
CCCCTGTGGATATCTTGGCGAGCCGAGCGGCAAGTGCTCGTGTACACCGGACATGGTCCAGCGCTATCGCAACAAGCTTT
CGGGGCCGTTGTTGGATCGGATTGATCTGCACCTGACGGTGGCGCGGGAAGCGACGGCGTTGAACCCGCAGGTAAAGCCG
GGAGAAGACAGCGCCAGCGCCGCAGCGTTGGTAGCCGAGGCGCGAGAACGGCAGCAAAAGCGTCAAGGCTGCGCCAATGC
GTTTCTCGATCTGCCGGGATTGAAGCGGCACTGCAAGTTATCCACAGTCGACGAAGCCTGGCTGGAGTCGGCCTGTGAGC
GTTTAACGCTATCGCTGCGTTCCGCGCACCGGCTTCTCAAGGTCGCCCGCACTCTGGCAGACCTCGAGCAAGTCGATGCA
ATCAAACGCGAACACTTGGCCGAGGCACTGCAATACCGGCCGGCGACGCCTTAA

Domains

Predicted by InterproScan.

• Subunit ChlI of Mg-chelatase (ChlI) (21-142)

• Magnesium chelatase, subunit ChlI C-terminal (Mg_chelatase_C) (401-493)

• Magnesium chelatase, subunit ChlI (Mg_chelatase) (190-390)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Vibrio cholerae strain A1552	54.545	99.598	0.543
comM	Vibrio campbellii strain DS40M4	54.343	99.598	0.541
comM	Haemophilus influenzae Rd KW20	53.307	100	0.535
comM	Glaesserella parasuis strain SC1401	52.8	100	0.531
comM	Legionella pneumophila str. Paris	50.402	100	0.505
comM	Legionella pneumophila strain ERS1305867	50.402	100	0.505
RA0C_RS07335	Riemerella anatipestifer ATCC 11845 = DSM 15868	46.507	100	0.469