Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | ACI3L7_RS01895 | Genome accession | NZ_CP173387 |
| Coordinates | 401825..402361 (-) | Length | 178 a.a. |
| NCBI ID | WP_005432828.1 | Uniprot ID | A0A812GP34 |
| Organism | Vibrio campbellii strain LB135 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 396825..407361
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACI3L7_RS01875 (ACI3L7_01875) | - | 397139..397468 (-) | 330 | WP_005533781.1 | hypothetical protein | - |
| ACI3L7_RS01880 (ACI3L7_01880) | gspM | 397461..398111 (-) | 651 | WP_274290777.1 | type II secretion system protein GspM | - |
| ACI3L7_RS01885 (ACI3L7_01885) | - | 398108..399556 (-) | 1449 | WP_050905606.1 | MSHA biogenesis protein MshI | - |
| ACI3L7_RS01890 (ACI3L7_01890) | csrD | 399568..401577 (-) | 2010 | WP_005432793.1 | RNase E specificity factor CsrD | - |
| ACI3L7_RS01895 (ACI3L7_01895) | ssb | 401825..402361 (-) | 537 | WP_005432828.1 | single-stranded DNA-binding protein | Machinery gene |
| ACI3L7_RS01900 (ACI3L7_01900) | qstR | 402655..403299 (+) | 645 | WP_005432827.1 | LuxR C-terminal-related transcriptional regulator | Regulator |
| ACI3L7_RS01905 (ACI3L7_01905) | galU | 403464..404336 (+) | 873 | WP_005432802.1 | UTP--glucose-1-phosphate uridylyltransferase GalU | - |
| ACI3L7_RS01910 (ACI3L7_01910) | uvrA | 404475..407297 (+) | 2823 | WP_394158161.1 | excinuclease ABC subunit UvrA | - |
Sequence
Protein
Download Length: 178 a.a. Molecular weight: 19774.84 Da Isoelectric Point: 4.9269
>NTDB_id=1071910 ACI3L7_RS01895 WP_005432828.1 401825..402361(-) (ssb) [Vibrio campbellii strain LB135]
MASRGINKVILVGNLGNDPEIRYMPNGGAVANITIATSESWRDKATGEQREKTEWHRVVLFGKLAEVAGEYLRKGSQVYV
EGQLQTRKWQDQSGQDRYSTEVVVQGFNGVMQMLGGRAQGGAPMGGGQPQQQQQGGWGQPQQPAQQQYNAPQQQQQAPQQ
PQQQYNEPPMDFDDDIPF
MASRGINKVILVGNLGNDPEIRYMPNGGAVANITIATSESWRDKATGEQREKTEWHRVVLFGKLAEVAGEYLRKGSQVYV
EGQLQTRKWQDQSGQDRYSTEVVVQGFNGVMQMLGGRAQGGAPMGGGQPQQQQQGGWGQPQQPAQQQYNAPQQQQQAPQQ
PQQQYNEPPMDFDDDIPF
Nucleotide
Download Length: 537 bp
>NTDB_id=1071910 ACI3L7_RS01895 WP_005432828.1 401825..402361(-) (ssb) [Vibrio campbellii strain LB135]
ATGGCCAGCCGTGGAATTAACAAAGTTATTTTGGTGGGGAATCTAGGTAACGACCCTGAAATTCGTTACATGCCTAATGG
CGGTGCAGTAGCAAACATCACGATTGCAACTTCTGAGTCATGGCGTGATAAAGCGACTGGCGAACAGCGCGAAAAAACAG
AATGGCACCGTGTTGTGTTGTTCGGCAAACTTGCTGAAGTAGCAGGCGAGTACCTACGTAAAGGTTCTCAAGTTTACGTT
GAAGGTCAACTTCAAACTCGTAAATGGCAAGACCAAAGTGGCCAAGACCGCTACTCAACAGAAGTGGTTGTTCAAGGCTT
CAATGGCGTAATGCAAATGCTTGGTGGCCGTGCTCAAGGTGGCGCACCAATGGGTGGTGGTCAGCCTCAACAGCAGCAAC
AAGGTGGTTGGGGTCAACCTCAACAACCAGCTCAGCAGCAATACAATGCTCCTCAGCAACAGCAACAGGCTCCGCAGCAA
CCTCAGCAGCAATACAACGAGCCACCAATGGATTTCGACGACGATATTCCGTTCTAA
ATGGCCAGCCGTGGAATTAACAAAGTTATTTTGGTGGGGAATCTAGGTAACGACCCTGAAATTCGTTACATGCCTAATGG
CGGTGCAGTAGCAAACATCACGATTGCAACTTCTGAGTCATGGCGTGATAAAGCGACTGGCGAACAGCGCGAAAAAACAG
AATGGCACCGTGTTGTGTTGTTCGGCAAACTTGCTGAAGTAGCAGGCGAGTACCTACGTAAAGGTTCTCAAGTTTACGTT
GAAGGTCAACTTCAAACTCGTAAATGGCAAGACCAAAGTGGCCAAGACCGCTACTCAACAGAAGTGGTTGTTCAAGGCTT
CAATGGCGTAATGCAAATGCTTGGTGGCCGTGCTCAAGGTGGCGCACCAATGGGTGGTGGTCAGCCTCAACAGCAGCAAC
AAGGTGGTTGGGGTCAACCTCAACAACCAGCTCAGCAGCAATACAATGCTCCTCAGCAACAGCAACAGGCTCCGCAGCAA
CCTCAGCAGCAATACAACGAGCCACCAATGGATTTCGACGACGATATTCCGTTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Vibrio cholerae strain A1552 |
80.447 |
100 |
0.809 |
| ssb | Glaesserella parasuis strain SC1401 |
56.545 |
100 |
0.607 |
| ssb | Neisseria meningitidis MC58 |
48.333 |
100 |
0.489 |
| ssb | Neisseria gonorrhoeae MS11 |
48.333 |
100 |
0.489 |