Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | ACI3L9_RS06685 | Genome accession | NZ_CP173385 |
| Coordinates | 1480814..1481350 (-) | Length | 178 a.a. |
| NCBI ID | WP_005432828.1 | Uniprot ID | A0A812GP34 |
| Organism | Vibrio campbellii strain LB198 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1475814..1486350
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACI3L9_RS06665 (ACI3L9_06665) | - | 1476128..1476457 (-) | 330 | WP_005533781.1 | hypothetical protein | - |
| ACI3L9_RS06670 (ACI3L9_06670) | gspM | 1476450..1477100 (-) | 651 | WP_038891137.1 | type II secretion system protein GspM | - |
| ACI3L9_RS06675 (ACI3L9_06675) | - | 1477097..1478545 (-) | 1449 | WP_079402759.1 | MSHA biogenesis protein MshI | - |
| ACI3L9_RS06680 (ACI3L9_06680) | csrD | 1478557..1480566 (-) | 2010 | WP_005432793.1 | RNase E specificity factor CsrD | - |
| ACI3L9_RS06685 (ACI3L9_06685) | ssb | 1480814..1481350 (-) | 537 | WP_005432828.1 | single-stranded DNA-binding protein | Machinery gene |
| ACI3L9_RS06690 (ACI3L9_06690) | qstR | 1481644..1482288 (+) | 645 | WP_079402760.1 | LuxR C-terminal-related transcriptional regulator | Regulator |
| ACI3L9_RS06695 (ACI3L9_06695) | galU | 1482453..1483325 (+) | 873 | WP_005432802.1 | UTP--glucose-1-phosphate uridylyltransferase GalU | - |
| ACI3L9_RS06700 (ACI3L9_06700) | uvrA | 1483464..1486286 (+) | 2823 | WP_079402761.1 | excinuclease ABC subunit UvrA | - |
Sequence
Protein
Download Length: 178 a.a. Molecular weight: 19774.84 Da Isoelectric Point: 4.9269
>NTDB_id=1071863 ACI3L9_RS06685 WP_005432828.1 1480814..1481350(-) (ssb) [Vibrio campbellii strain LB198]
MASRGINKVILVGNLGNDPEIRYMPNGGAVANITIATSESWRDKATGEQREKTEWHRVVLFGKLAEVAGEYLRKGSQVYV
EGQLQTRKWQDQSGQDRYSTEVVVQGFNGVMQMLGGRAQGGAPMGGGQPQQQQQGGWGQPQQPAQQQYNAPQQQQQAPQQ
PQQQYNEPPMDFDDDIPF
MASRGINKVILVGNLGNDPEIRYMPNGGAVANITIATSESWRDKATGEQREKTEWHRVVLFGKLAEVAGEYLRKGSQVYV
EGQLQTRKWQDQSGQDRYSTEVVVQGFNGVMQMLGGRAQGGAPMGGGQPQQQQQGGWGQPQQPAQQQYNAPQQQQQAPQQ
PQQQYNEPPMDFDDDIPF
Nucleotide
Download Length: 537 bp
>NTDB_id=1071863 ACI3L9_RS06685 WP_005432828.1 1480814..1481350(-) (ssb) [Vibrio campbellii strain LB198]
ATGGCCAGCCGTGGAATTAACAAAGTTATTTTGGTGGGGAATCTAGGTAACGACCCTGAAATTCGTTACATGCCTAATGG
CGGTGCAGTAGCAAACATCACGATTGCAACTTCTGAGTCATGGCGTGATAAAGCGACTGGCGAACAGCGCGAAAAAACAG
AATGGCACCGTGTTGTGCTGTTCGGCAAACTTGCTGAAGTAGCAGGCGAGTACCTACGTAAAGGTTCTCAAGTTTACGTT
GAAGGTCAACTTCAAACTCGTAAATGGCAAGACCAAAGTGGCCAAGACCGCTACTCAACAGAAGTGGTTGTTCAAGGCTT
CAATGGCGTAATGCAAATGCTTGGTGGCCGTGCTCAAGGTGGCGCACCAATGGGCGGTGGTCAGCCTCAACAGCAGCAAC
AAGGTGGTTGGGGTCAACCTCAACAACCAGCTCAGCAGCAATACAATGCTCCTCAGCAACAGCAACAGGCTCCGCAGCAA
CCTCAGCAGCAATACAACGAGCCACCAATGGATTTCGACGACGATATTCCGTTCTAA
ATGGCCAGCCGTGGAATTAACAAAGTTATTTTGGTGGGGAATCTAGGTAACGACCCTGAAATTCGTTACATGCCTAATGG
CGGTGCAGTAGCAAACATCACGATTGCAACTTCTGAGTCATGGCGTGATAAAGCGACTGGCGAACAGCGCGAAAAAACAG
AATGGCACCGTGTTGTGCTGTTCGGCAAACTTGCTGAAGTAGCAGGCGAGTACCTACGTAAAGGTTCTCAAGTTTACGTT
GAAGGTCAACTTCAAACTCGTAAATGGCAAGACCAAAGTGGCCAAGACCGCTACTCAACAGAAGTGGTTGTTCAAGGCTT
CAATGGCGTAATGCAAATGCTTGGTGGCCGTGCTCAAGGTGGCGCACCAATGGGCGGTGGTCAGCCTCAACAGCAGCAAC
AAGGTGGTTGGGGTCAACCTCAACAACCAGCTCAGCAGCAATACAATGCTCCTCAGCAACAGCAACAGGCTCCGCAGCAA
CCTCAGCAGCAATACAACGAGCCACCAATGGATTTCGACGACGATATTCCGTTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Vibrio cholerae strain A1552 |
80.447 |
100 |
0.809 |
| ssb | Glaesserella parasuis strain SC1401 |
56.545 |
100 |
0.607 |
| ssb | Neisseria meningitidis MC58 |
48.333 |
100 |
0.489 |
| ssb | Neisseria gonorrhoeae MS11 |
48.333 |
100 |
0.489 |