Detailed information
Bioinformatically predicted
Overview
| Name | dprA | Type | Machinery gene |
| Locus tag | ACIRXM_RS05295 | Genome accession | NZ_CP173234 |
| Coordinates | 1030418..1031518 (+) | Length | 366 a.a. |
| NCBI ID | WP_035687998.1 | Uniprot ID | - |
| Organism | Avibacterium paragallinarum strain npAP/NC-USA/20240110/S1-1 | ||
| Function | ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing |
||
Genomic Context
Location: 1025418..1036518
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACIRXM_RS05270 (ACIRXM_05275) | mog | 1026160..1026744 (+) | 585 | WP_410687620.1 | molybdopterin adenylyltransferase | - |
| ACIRXM_RS05275 (ACIRXM_05280) | glnB | 1026764..1027102 (+) | 339 | WP_103854008.1 | nitrogen regulatory protein P-II | - |
| ACIRXM_RS05280 (ACIRXM_05285) | - | 1027102..1028154 (+) | 1053 | WP_410687621.1 | AI-2E family transporter | - |
| ACIRXM_RS05285 (ACIRXM_05290) | - | 1028528..1029697 (+) | 1170 | WP_410687623.1 | bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN | - |
| ACIRXM_RS05290 (ACIRXM_05295) | pilF/pilF2 | 1029731..1030273 (+) | 543 | WP_046097864.1 | type IV pilus biogenesis/stability protein PilW | Machinery gene |
| ACIRXM_RS05295 (ACIRXM_05300) | dprA | 1030418..1031518 (+) | 1101 | WP_035687998.1 | DNA-processing protein DprA | Machinery gene |
| ACIRXM_RS05300 (ACIRXM_05305) | rsmD | 1031515..1032123 (-) | 609 | WP_410687624.1 | 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD | - |
| ACIRXM_RS05305 (ACIRXM_05310) | ftsY | 1032279..1033772 (+) | 1494 | WP_410687625.1 | signal recognition particle-docking protein FtsY | - |
| ACIRXM_RS05310 (ACIRXM_05315) | - | 1033986..1034126 (+) | 141 | WP_410687626.1 | hypothetical protein | - |
| ACIRXM_RS05315 (ACIRXM_05320) | glpQ | 1034318..1035412 (-) | 1095 | WP_410687627.1 | glycerophosphodiester phosphodiesterase | - |
Sequence
Protein
Download Length: 366 a.a. Molecular weight: 40877.67 Da Isoelectric Point: 4.8599
>NTDB_id=1071074 ACIRXM_RS05295 WP_035687998.1 1030418..1031518(+) (dprA) [Avibacterium paragallinarum strain npAP/NC-USA/20240110/S1-1]
MITNEMLLRLLQIPKLGANTIQKILGEISLTQLLDYDEYAFKQIGWSEKQIQRWFYPERKFIDPALQWAESAGNFLLNFT
DEDYPYLLKQIPSAPPILFLQGNLTALSQPQIAIVGSRYCSNYGEYWAKYFASELSLAGFAITSGLALGIDGFCHQAVVD
IQGQTLAVLGSGLDKVYPAKHRRLAEQIIEHNGTLISEFLPAQAPVAENFPRRNRIISGLSLGTLIIEATERSGSLITAR
YALEQNREIFALPGNIQNGFSEGCHKLIKQGATLVESVTDILENLPHYQYVTPNYTEQKSPSSANEQLTSEPPSYPELYA
QLSHIPISLDELSARLSLPIDVLLTQLLSLELQQLAVCENGLYRRS
MITNEMLLRLLQIPKLGANTIQKILGEISLTQLLDYDEYAFKQIGWSEKQIQRWFYPERKFIDPALQWAESAGNFLLNFT
DEDYPYLLKQIPSAPPILFLQGNLTALSQPQIAIVGSRYCSNYGEYWAKYFASELSLAGFAITSGLALGIDGFCHQAVVD
IQGQTLAVLGSGLDKVYPAKHRRLAEQIIEHNGTLISEFLPAQAPVAENFPRRNRIISGLSLGTLIIEATERSGSLITAR
YALEQNREIFALPGNIQNGFSEGCHKLIKQGATLVESVTDILENLPHYQYVTPNYTEQKSPSSANEQLTSEPPSYPELYA
QLSHIPISLDELSARLSLPIDVLLTQLLSLELQQLAVCENGLYRRS
Nucleotide
Download Length: 1101 bp
>NTDB_id=1071074 ACIRXM_RS05295 WP_035687998.1 1030418..1031518(+) (dprA) [Avibacterium paragallinarum strain npAP/NC-USA/20240110/S1-1]
ATGATAACCAATGAGATGTTACTCCGTTTGCTCCAAATTCCTAAACTTGGAGCAAATACTATTCAAAAAATACTGGGTGA
AATTAGTCTTACACAGCTTTTAGATTATGATGAATACGCGTTTAAACAGATTGGTTGGTCAGAAAAGCAAATTCAACGTT
GGTTTTACCCAGAACGAAAATTCATTGATCCTGCGTTACAATGGGCAGAAAGTGCGGGTAATTTTTTGCTTAATTTTACC
GATGAAGATTACCCTTATTTGCTGAAGCAAATTCCCTCCGCCCCGCCGATTTTATTTTTGCAAGGAAATTTGACCGCACT
TTCTCAACCACAAATTGCAATAGTAGGTAGCCGTTATTGCTCGAATTATGGGGAATATTGGGCGAAGTATTTTGCTTCAG
AGTTGAGTCTTGCGGGCTTTGCGATAACCAGTGGGCTAGCTTTAGGGATCGACGGATTTTGTCATCAAGCCGTGGTGGAT
ATTCAAGGGCAAACGCTGGCGGTGCTTGGAAGTGGGTTGGATAAGGTGTATCCTGCAAAACATCGCCGTTTGGCTGAGCA
AATTATTGAGCATAACGGCACATTGATTTCCGAATTTCTCCCCGCGCAAGCGCCCGTTGCGGAGAATTTCCCACGCCGAA
ACCGTATTATTAGCGGGCTTTCGCTTGGCACGCTAATTATTGAAGCCACCGAGCGGAGCGGTTCACTCATTACGGCTCGT
TATGCGTTGGAGCAAAACCGTGAGATCTTTGCCTTGCCGGGCAATATTCAAAATGGCTTTAGTGAGGGCTGTCATAAGCT
CATCAAACAAGGGGCGACATTAGTGGAGAGCGTGACGGATATTTTAGAAAATCTCCCACATTATCAGTATGTTACACCGA
ATTATACCGAACAGAAATCGCCATCGTCGGCGAACGAGCAGCTAACTTCAGAGCCACCAAGTTATCCCGAACTTTACGCT
CAATTAAGCCACATTCCCATTAGCCTTGATGAACTTTCAGCCCGTTTGTCATTGCCGATTGATGTCTTATTAACCCAATT
ATTAAGTTTAGAATTGCAACAATTAGCGGTTTGTGAAAATGGGCTGTATCGGCGAAGTTAG
ATGATAACCAATGAGATGTTACTCCGTTTGCTCCAAATTCCTAAACTTGGAGCAAATACTATTCAAAAAATACTGGGTGA
AATTAGTCTTACACAGCTTTTAGATTATGATGAATACGCGTTTAAACAGATTGGTTGGTCAGAAAAGCAAATTCAACGTT
GGTTTTACCCAGAACGAAAATTCATTGATCCTGCGTTACAATGGGCAGAAAGTGCGGGTAATTTTTTGCTTAATTTTACC
GATGAAGATTACCCTTATTTGCTGAAGCAAATTCCCTCCGCCCCGCCGATTTTATTTTTGCAAGGAAATTTGACCGCACT
TTCTCAACCACAAATTGCAATAGTAGGTAGCCGTTATTGCTCGAATTATGGGGAATATTGGGCGAAGTATTTTGCTTCAG
AGTTGAGTCTTGCGGGCTTTGCGATAACCAGTGGGCTAGCTTTAGGGATCGACGGATTTTGTCATCAAGCCGTGGTGGAT
ATTCAAGGGCAAACGCTGGCGGTGCTTGGAAGTGGGTTGGATAAGGTGTATCCTGCAAAACATCGCCGTTTGGCTGAGCA
AATTATTGAGCATAACGGCACATTGATTTCCGAATTTCTCCCCGCGCAAGCGCCCGTTGCGGAGAATTTCCCACGCCGAA
ACCGTATTATTAGCGGGCTTTCGCTTGGCACGCTAATTATTGAAGCCACCGAGCGGAGCGGTTCACTCATTACGGCTCGT
TATGCGTTGGAGCAAAACCGTGAGATCTTTGCCTTGCCGGGCAATATTCAAAATGGCTTTAGTGAGGGCTGTCATAAGCT
CATCAAACAAGGGGCGACATTAGTGGAGAGCGTGACGGATATTTTAGAAAATCTCCCACATTATCAGTATGTTACACCGA
ATTATACCGAACAGAAATCGCCATCGTCGGCGAACGAGCAGCTAACTTCAGAGCCACCAAGTTATCCCGAACTTTACGCT
CAATTAAGCCACATTCCCATTAGCCTTGATGAACTTTCAGCCCGTTTGTCATTGCCGATTGATGTCTTATTAACCCAATT
ATTAAGTTTAGAATTGCAACAATTAGCGGTTTGTGAAAATGGGCTGTATCGGCGAAGTTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| dprA | Haemophilus influenzae Rd KW20 |
62.973 |
100 |
0.637 |
| dprA | Glaesserella parasuis strain SC1401 |
57.02 |
95.355 |
0.544 |
| dprA | Vibrio cholerae strain A1552 |
43.443 |
100 |
0.434 |
| dprA | Vibrio campbellii strain DS40M4 |
42.061 |
98.087 |
0.413 |
| dprA | Legionella pneumophila strain ERS1305867 |
40.437 |
100 |
0.404 |