Detailed information NTG1070479

Bioinformatically predicted

Overview

• Name: comA
• Type: Regulator
• Locus tag: ACIQTD_RS00325
• Genome accession: NZ_CP173185
• Coordinates: 63738..65885 (+)
• Length: 715 a.a.
• NCBI ID: WP_270250903.1
• Uniprot ID: -
• Organism: Lactococcus lactis subsp. lactis strain MGEL24009
• Function: processing and transport of ComC (predicted from homology) Competence regulation

Genomic Context

Location: 58738..70885

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACIQTD_RS00300	-	59876..60343 (+)	468	WP_010905090.1	universal stress protein	-
ACIQTD_RS00305	-	60471..60668 (+)	198	WP_012896939.1	DUF4649 domain-containing protein	-
ACIQTD_RS00310	-	60699..61319 (+)	621	WP_012896940.1	alpha/beta hydrolase	-
ACIQTD_RS00315	-	61370..62539 (+)	1170	WP_015425630.1	ring-cleaving dioxygenase	-
ACIQTD_RS00320	-	62550..63140 (+)	591	WP_003132255.1	flavin reductase family protein	-
ACIQTD_RS00325	comA	63738..65885 (+)	2148	WP_270250903.1	peptide cleavage/export ABC transporter	Regulator
ACIQTD_RS00330	-	65900..67321 (+)	1422	WP_270250901.1	HlyD family secretion protein	-
ACIQTD_RS00335	-	67415..67552 (+)	138	WP_021214958.1	lactococcin family bacteriocin	-
ACIQTD_RS00340	-	67597..68277 (+)	681	WP_225509962.1	CPBP family intramembrane glutamic endopeptidase	-
ACIQTD_RS00345	-	68703..69155 (+)	453	WP_010905102.1	transporter	-
ACIQTD_RS00350	-	69366..69893 (-)	528	WP_270250898.1	CPBP family intramembrane glutamic endopeptidase	-
ACIQTD_RS00355	-	70336..70515 (-)	180	WP_023163573.1	hypothetical protein	-
ACIQTD_RS00360	-	70536..70715 (-)	180	WP_023163574.1	lactococcin family bacteriocin	-

Sequence

Protein

• Length: 715 a.a.
• Molecular weight: 79869.44 Da
• Isoelectric Point: 8.6006

>NTDB_id=1070479 ACIQTD_RS00325 WP_270250903.1 63738..65885(+) (comA) [Lactococcus lactis subsp. lactis strain MGEL24009]
MKFKKKNYTSQVDEMDCGCAALSMILKSYGTEKSLASLRLLAGTTIEGTSALGIKKAGEGLGFVVQVLRADASLFEMKKV
PYPFIAHVIKNQKYPHYYVITGANKNSVFIADPDPTVKMTKLSKEVFLSEWTGISLFLSPTPSYQPTKEKTSSLLSFIPI
ITRQKKVILNIVIASFIVTLINILGSYYLQSMIDSYIPNALMGTLGIISVGLLLTYIIQQVLEFAKAFLLNVLSQRLAID
VILSYIRHIFQLPMSFFSTRRTGEITSRFSDASSILDAIASTILSLFLDLTIVLMTGLILGLQNMQLFLLVLLAIPLYIV
VIIIFTPLFERQNHEVMQTNAILNSSIIEDINGIETIKALASEQERYQKIDYEFASYLKEAFTLQQSEAIQTAIKTTVQL
VLNVLILWFGASLVMHQKITLGQLITFNALLSYFTNPITNIINLQTKLQKARVANERLNEVYLVPSEFEEKKTELSLSHF
NLNMSEISYQYGFGRKVLSEIKLSIKENEKLTIVGMSGSGKSTLVKLLVNFFQPTSGTITLGGIDLQQFDKHQLRRLINY
LPQQPYIFTGSIMDNLLLGASEATSQEEIIRAVELAEIRADIEQMQLGYQTELSSDASSLSGGQKQRIALARALLSPAKI
LILDEATSNLDMITEKKILKNLLALDKTIIFIAHRLSVAEMSHRIIVIEQGKVIESGSHSELLAQNGFYAQLYHN

Nucleotide

• Length: 2148 bp

>NTDB_id=1070479 ACIQTD_RS00325 WP_270250903.1 63738..65885(+) (comA) [Lactococcus lactis subsp. lactis strain MGEL24009]
ATGAAATTTAAAAAGAAAAATTATACCTCCCAAGTAGATGAAATGGATTGTGGATGTGCTGCTTTATCAATGATTTTAAA
ATCCTATGGGACAGAAAAATCGCTTGCCTCTCTTCGTTTACTTGCTGGTACAACAATCGAGGGAACTTCCGCTTTAGGAA
TAAAAAAAGCAGGAGAAGGTTTAGGTTTTGTAGTTCAAGTACTAAGAGCTGATGCAAGCCTTTTTGAAATGAAGAAAGTC
CCTTACCCTTTTATTGCTCATGTCATCAAGAACCAAAAGTATCCACACTACTATGTGATAACTGGCGCAAATAAAAATTC
GGTATTCATCGCAGATCCTGACCCAACCGTTAAAATGACAAAACTTTCAAAAGAAGTTTTCTTATCAGAGTGGACAGGCA
TTAGCTTATTTCTTTCACCTACCCCATCCTATCAGCCCACTAAAGAAAAAACTTCTTCATTATTATCTTTTATCCCAATT
ATCACCCGTCAAAAGAAAGTCATTCTCAATATTGTAATTGCCTCATTCATTGTAACGTTGATTAATATTCTAGGGTCTTA
CTACCTCCAGAGCATGATTGATAGTTACATTCCAAATGCCTTAATGGGAACTTTAGGGATTATCTCAGTAGGGCTATTGT
TAACTTATATTATCCAACAAGTCTTAGAGTTTGCTAAGGCTTTCTTACTAAACGTTCTTTCTCAAAGATTAGCCATTGAT
GTCATCCTTTCCTATATTAGACACATTTTCCAACTCCCGATGTCTTTCTTTTCGACTAGAAGAACAGGGGAAATTACCAG
TCGGTTTTCCGATGCCAGTTCTATTTTGGATGCTATTGCCTCAACGATTCTTTCGCTCTTTTTAGATTTAACCATTGTTC
TTATGACAGGACTGATTTTAGGGCTTCAAAATATGCAACTCTTTCTTCTCGTTCTTTTGGCAATCCCACTTTATATTGTT
GTTATTATTATTTTTACTCCGCTTTTTGAAAGACAAAATCATGAAGTTATGCAAACCAATGCCATCTTAAATTCCTCAAT
TATTGAAGACATTAATGGGATTGAAACCATCAAAGCGCTCGCCAGTGAACAAGAGAGATATCAAAAAATTGACTACGAAT
TTGCAAGTTATCTAAAAGAGGCTTTCACTTTACAACAGTCAGAAGCCATTCAGACGGCAATAAAAACGACAGTACAACTT
GTACTAAATGTTCTTATTTTATGGTTTGGTGCATCTTTAGTCATGCATCAAAAAATTACCCTCGGACAACTCATTACTTT
TAATGCCTTGCTTTCTTACTTTACAAATCCAATTACTAATATCATTAACCTTCAAACAAAACTACAAAAGGCAAGGGTAG
CCAATGAACGATTAAATGAGGTCTATCTTGTACCCAGTGAATTTGAAGAAAAGAAAACAGAACTGTCCCTCTCACATTTT
AATTTAAACATGTCTGAGATTTCATATCAATATGGTTTTGGCAGAAAAGTCTTATCTGAGATAAAACTGTCTATTAAAGA
AAATGAAAAGTTGACCATTGTTGGTATGAGCGGTTCAGGGAAGAGTACTCTTGTTAAATTATTGGTCAACTTCTTTCAAC
CCACTTCTGGTACCATTACTTTAGGTGGAATTGACCTTCAACAGTTTGATAAACATCAACTTCGACGATTAATCAACTAT
CTTCCCCAACAACCTTATATTTTCACAGGTTCAATTATGGATAATTTACTTTTAGGCGCTAGTGAAGCTACTTCACAAGA
AGAGATTATTAGAGCGGTGGAATTGGCAGAAATCCGTGCAGATATTGAACAAATGCAATTAGGTTATCAAACTGAACTCT
CAAGTGATGCAAGTAGTTTATCGGGAGGACAAAAACAGAGAATTGCGCTCGCTCGTGCCCTCCTTTCTCCTGCCAAAATA
CTCATCTTAGACGAAGCCACCAGTAATCTTGATATGATTACTGAAAAGAAAATATTAAAGAATTTGTTGGCACTAGATAA
GACAATTATTTTCATTGCTCACCGCCTCTCTGTAGCGGAAATGAGCCATCGTATCATTGTCATTGAACAAGGAAAAGTGA
TAGAAAGTGGTTCACATTCAGAACTGCTTGCTCAAAATGGCTTTTACGCACAACTTTACCATAACTAA

Domains

Predicted by InterproScan.

• ABC transporter transmembrane region (ABC_membrane) (169-437)

• ABC transporter (ABC_tran) (498-648)

• Peptidase C39 family (Peptidase_C39) (6-142)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Streptococcus gordonii str. Challis substr. CH1	61.064	99.86	0.61
comA	Streptococcus mitis NCTC 12261	60.084	99.86	0.6
comA	Streptococcus mitis SK321	59.944	99.86	0.599
comA	Streptococcus pneumoniae Rx1	59.664	99.86	0.596
comA	Streptococcus pneumoniae D39	59.664	99.86	0.596
comA	Streptococcus pneumoniae R6	59.664	99.86	0.596
comA	Streptococcus pneumoniae TIGR4	59.384	99.86	0.593
comA/nlmT	Streptococcus mutans UA159	58.774	100	0.59