Detailed information NTG1068033

Bioinformatically predicted

Overview

• Name: pilU
• Type: Machinery gene
• Locus tag: ACG2XO_RS06085
• Genome accession: NZ_CP172558
• Coordinates: 1267281..1268474 (+)
• Length: 397 a.a.
• NCBI ID: WP_410499927.1
• Uniprot ID: -
• Organism: Chitinibacter sp. S2-10
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1262281..1273474

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACG2XO_RS06060 (ACG2XO_06060)	-	1263240..1263572 (+)	333	WP_410499922.1	antibiotic biosynthesis monooxygenase family protein	-
ACG2XO_RS06065 (ACG2XO_06065)	-	1263756..1264679 (+)	924	WP_410499923.1	methylenetetrahydrofolate reductase	-
ACG2XO_RS06070 (ACG2XO_06070)	-	1264706..1265344 (-)	639	WP_410499924.1	hypothetical protein	-
ACG2XO_RS06075 (ACG2XO_06075)	-	1265341..1266048 (-)	708	WP_410499925.1	hypothetical protein	-
ACG2XO_RS06080 (ACG2XO_06080)	-	1266209..1267162 (+)	954	WP_410499926.1	TraB/GumN family protein	-
ACG2XO_RS06085 (ACG2XO_06085)	pilU	1267281..1268474 (+)	1194	WP_410499927.1	PilT/PilU family type 4a pilus ATPase	Machinery gene
ACG2XO_RS06090 (ACG2XO_06090)	secA	1268579..1271320 (-)	2742	WP_410499928.1	preprotein translocase subunit SecA	-
ACG2XO_RS06095 (ACG2XO_06095)	-	1271441..1272328 (-)	888	WP_410499929.1	M23 family metallopeptidase	-
ACG2XO_RS06100 (ACG2XO_06100)	-	1272447..1272887 (+)	441	WP_410499930.1	DciA family protein	-

Sequence

Protein

• Length: 397 a.a.
• Molecular weight: 44603.25 Da
• Isoelectric Point: 6.1198

>NTDB_id=1068033 ACG2XO_RS06085 WP_410499927.1 1267281..1268474(+) (pilU) [Chitinibacter sp. S2-10]
MSPEQALKTMHDLLRMMIQHKASDLFIADDFPPALKINGKMTPVGQQKLNAVATRALAYAIMRPDQQAEFDEEFECNFAI
SPEGIGRFRVNVFMQQEKVGMVLRTITSKIPNFDEMGLPKILKEVVMSKRGLVLLVGGTGSGKSTTMAAMIDYRNEHSHG
HIITIEDPVEYLHKNKNCLVTHREVGRDTKGWFAALKNTLRQAPDVILIGEIRDRETMEYAMNFAETGHLCMGTLHANSS
NQALERIVNFFPEERHPQLYMDLSLNMRGIISQRLVPTPDGKGRCAAIEILLNTPLVADMIFKGDVGGVKTAMQKSKELG
MQTFDMALFDLYEAGKISMEEALKNADSLNELRLKIKLNSQHHRKEEHSSGLDHLSLEVHEEPEEAEEDGVQEKTTS

Nucleotide

• Length: 1194 bp

>NTDB_id=1068033 ACG2XO_RS06085 WP_410499927.1 1267281..1268474(+) (pilU) [Chitinibacter sp. S2-10]
ATGAGCCCCGAACAAGCACTAAAAACCATGCACGATTTGTTGCGCATGATGATTCAACACAAAGCATCCGATCTGTTTAT
CGCCGATGACTTCCCGCCCGCACTGAAAATCAACGGTAAGATGACGCCGGTCGGGCAGCAAAAGCTCAATGCGGTGGCAA
CGCGCGCGCTGGCGTACGCGATTATGCGGCCTGATCAGCAGGCCGAGTTTGACGAAGAATTCGAATGCAATTTTGCCATC
AGCCCGGAAGGTATCGGCCGTTTTCGCGTCAATGTGTTTATGCAGCAGGAAAAAGTCGGCATGGTGCTCAGGACGATCAC
CAGCAAGATTCCCAATTTTGACGAAATGGGGCTGCCGAAGATTTTAAAAGAAGTCGTGATGAGCAAACGCGGGCTGGTGC
TGCTGGTGGGGGGCACGGGATCGGGCAAATCAACGACGATGGCGGCGATGATTGATTACCGCAACGAGCACAGCCATGGC
CATATCATCACGATTGAAGACCCGGTCGAATATCTGCATAAAAACAAGAATTGTCTCGTCACGCACCGCGAAGTGGGCCG
CGATACCAAGGGCTGGTTTGCCGCGCTGAAAAACACCTTGCGCCAGGCGCCCGACGTGATTCTGATTGGCGAGATTCGCG
ACCGTGAAACGATGGAATACGCGATGAATTTCGCCGAAACCGGCCATCTGTGCATGGGGACGCTGCACGCCAATAGCTCG
AATCAGGCGTTGGAGCGCATCGTCAATTTCTTCCCCGAAGAGCGCCACCCACAGCTGTATATGGATTTATCGCTGAATAT
GCGCGGCATTATTTCGCAGCGGTTGGTGCCGACGCCCGATGGCAAAGGGCGCTGTGCGGCAATCGAGATTCTGCTCAATA
CACCGCTGGTCGCCGATATGATTTTCAAAGGCGACGTCGGCGGTGTGAAAACGGCGATGCAGAAATCGAAAGAGCTGGGG
ATGCAGACCTTTGATATGGCGCTGTTTGATCTGTATGAAGCGGGAAAAATCAGCATGGAAGAAGCGCTGAAGAACGCTGA
TTCGCTCAATGAATTGCGGCTGAAGATCAAGCTCAATAGCCAGCATCACCGTAAGGAAGAGCACAGCAGCGGGCTGGATC
ACTTATCGCTCGAAGTGCACGAAGAGCCGGAAGAAGCCGAGGAGGACGGTGTGCAGGAAAAAACTACTTCCTAG

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (113-277)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilU	Pseudomonas stutzeri DSM 10701	58.453	87.909	0.514
pilU	Acinetobacter baylyi ADP1	56.657	88.917	0.504
pilU	Vibrio cholerae strain A1552	52.394	89.421	0.469
pilT	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	43.62	84.887	0.37
pilT	Pseudomonas aeruginosa PAK	42.985	84.383	0.363