Detailed information NTG1066532

Bioinformatically predicted

Overview

• Name: comFC
• Type: Machinery gene
• Locus tag: ACH2FV_RS16670
• Genome accession: NZ_CP172339
• Coordinates: 3208310..3208966 (-)
• Length: 218 a.a.
• NCBI ID: WP_326149053.1
• Uniprot ID: -
• Organism: Bacillus safensis subsp. safensis strain KGU003
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3203310..3213966

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACH2FV_RS16635 (ACH2FV_16635)	fliW	3203448..3203882 (-)	435	WP_395894099.1	flagellar assembly protein FliW	-
ACH2FV_RS16640 (ACH2FV_16640)	-	3203911..3204489 (-)	579	WP_024423616.1	DUF6470 family protein	-
ACH2FV_RS16645 (ACH2FV_16645)	flgL	3204536..3205444 (-)	909	WP_034281095.1	flagellar hook-associated protein FlgL	-
ACH2FV_RS16650 (ACH2FV_16650)	flgK	3205454..3206974 (-)	1521	WP_218677427.1	flagellar hook-associated protein FlgK	-
ACH2FV_RS16655 (ACH2FV_16655)	-	3206990..3207472 (-)	483	WP_326149054.1	flagellar protein FlgN	-
ACH2FV_RS16660 (ACH2FV_16660)	flgM	3207491..3207754 (-)	264	WP_024423620.1	flagellar biosynthesis anti-sigma factor FlgM	-
ACH2FV_RS16665 (ACH2FV_16665)	-	3207834..3208253 (-)	420	WP_024423621.1	TIGR03826 family flagellar region protein	-
ACH2FV_RS16670 (ACH2FV_16670)	comFC	3208310..3208966 (-)	657	WP_326149053.1	ComF family protein	Machinery gene
ACH2FV_RS16675 (ACH2FV_16675)	-	3208993..3209286 (-)	294	WP_024423623.1	late competence development ComFB family protein	-
ACH2FV_RS16680 (ACH2FV_16680)	comFA	3209335..3210732 (-)	1398	WP_395894762.1	DEAD/DEAH box helicase	Machinery gene
ACH2FV_RS16685 (ACH2FV_16685)	-	3210853..3211695 (-)	843	WP_041108019.1	DegV family protein	-
ACH2FV_RS16690 (ACH2FV_16690)	degU	3211911..3212600 (-)	690	WP_008348273.1	two-component system response regulator DegU	Regulator
ACH2FV_RS16695 (ACH2FV_16695)	degS	3212665..3213840 (-)	1176	WP_003213166.1	sensor histidine kinase	Regulator

Sequence

Protein

• Length: 218 a.a.
• Molecular weight: 24940.04 Da
• Isoelectric Point: 9.9145

>NTDB_id=1066532 ACH2FV_RS16670 WP_326149053.1 3208310..3208966(-) (comFC) [Bacillus safensis subsp. safensis strain KGU003]
MPAFTWKSFLLLNDDRLCVACKDHLVKIERPICPTCGRAQSNDQLCQDCNRWNERSDSTKILVKNRSVYTYNDLMKDVLA
RFKFRGDTALAELFKKDVQAAFKHSFCIKDPLLIPIPLSHERLKERGFNQSVIIASLLDKPILQPLVKIHQSKQSKKKKN
ERLDQKGLFQIKQTDAIVQRDIILVDDIYTTGATIYDAARILKDAGAKSVSSFTLIRS

Nucleotide

• Length: 657 bp

>NTDB_id=1066532 ACH2FV_RS16670 WP_326149053.1 3208310..3208966(-) (comFC) [Bacillus safensis subsp. safensis strain KGU003]
GTGCCTGCTTTTACATGGAAATCATTCCTACTATTAAATGATGATCGCCTTTGTGTAGCATGTAAGGATCACTTAGTAAA
GATTGAGCGTCCTATTTGTCCAACATGCGGAAGGGCGCAGTCAAATGACCAATTGTGCCAGGACTGTAACAGATGGAATG
AACGCTCTGATTCTACTAAAATCCTTGTAAAAAATAGGTCAGTTTATACTTACAATGATTTGATGAAAGATGTCCTTGCC
CGCTTTAAATTTCGGGGTGATACGGCTTTAGCTGAGCTGTTTAAAAAAGATGTACAAGCAGCATTTAAACATTCCTTCTG
CATAAAAGACCCATTGCTGATACCGATTCCTTTAAGTCATGAAAGACTAAAAGAAAGAGGATTTAATCAGTCCGTGATAA
TCGCTTCTTTGCTAGATAAGCCAATATTGCAACCACTCGTGAAAATACATCAAAGTAAGCAGTCTAAAAAAAAGAAAAAT
GAACGCCTAGATCAAAAAGGATTGTTTCAAATCAAGCAAACAGATGCGATTGTTCAAAGGGATATTATATTAGTTGATGA
TATCTATACAACGGGAGCAACCATCTATGATGCGGCAAGAATTTTGAAAGACGCAGGTGCTAAAAGTGTTTCTTCTTTTA
CGTTGATACGTAGTTAA

Domains

Predicted by InterproScan.

• Double zinc ribbon domain (DZR_2) (14-49)

• Phosphoribosyl transferase domain (Pribosyltran) (127-216)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFC	Bacillus subtilis subsp. subtilis str. 168	50.463	99.083	0.5
comFC/cflB	Streptococcus pneumoniae Rx1	36.744	98.624	0.362
comFC/cflB	Streptococcus pneumoniae D39	36.744	98.624	0.362
comFC/cflB	Streptococcus pneumoniae R6	36.744	98.624	0.362
comFC/cflB	Streptococcus pneumoniae TIGR4	36.744	98.624	0.362