Detailed information NTG1066223

Bioinformatically predicted

Overview

• Name: pilU
• Type: Machinery gene
• Locus tag: ACHZ97_RS15565
• Genome accession: NZ_CP172310
• Coordinates: 3301983..3303149 (-)
• Length: 388 a.a.
• NCBI ID: WP_396615646.1
• Uniprot ID: -
• Organism: Lysobacter soli strain P18
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3296983..3308149

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACHZ97_RS15560 (ACHZ97_15560)	-	3299629..3301902 (+)	2274	WP_396615645.1	ATP-binding protein	-
ACHZ97_RS15565 (ACHZ97_15565)	pilU	3301983..3303149 (-)	1167	WP_396615646.1	PilT/PilU family type 4a pilus ATPase	Machinery gene
ACHZ97_RS15570 (ACHZ97_15570)	pilT	3303309..3304346 (-)	1038	WP_396615647.1	type IV pilus twitching motility protein PilT	Machinery gene
ACHZ97_RS15575 (ACHZ97_15575)	-	3304457..3305140 (+)	684	WP_396615648.1	YggS family pyridoxal phosphate-dependent enzyme	-
ACHZ97_RS15580 (ACHZ97_15580)	proC	3305178..3306014 (+)	837	WP_396615649.1	pyrroline-5-carboxylate reductase	-
ACHZ97_RS15585 (ACHZ97_15585)	-	3306027..3306539 (+)	513	WP_396615650.1	DUF4426 domain-containing protein	-
ACHZ97_RS15590 (ACHZ97_15590)	-	3306514..3306858 (-)	345	WP_396615651.1	hypothetical protein	-
ACHZ97_RS15595 (ACHZ97_15595)	-	3306855..3307658 (-)	804	WP_396615652.1	cobalamin-binding protein	-
ACHZ97_RS15600 (ACHZ97_15600)	aac(6')	3307655..3308113 (-)	459	WP_396615653.1	aminoglycoside 6'-N-acetyltransferase	-

Sequence

Protein

• Length: 388 a.a.
• Molecular weight: 42869.43 Da
• Isoelectric Point: 7.0157

>NTDB_id=1066223 ACHZ97_RS15565 WP_396615646.1 3301983..3303149(-) (pilU) [Lysobacter soli strain P18]
MSTNTNGTTPASTGAIDFTSFLKLMAHQKASDLFITAGMPPSMKVHGKIAPITPNALTPQQSRDMVLNVMSPQQREEFEK
THECNFAIGLAGVGRFRVSCFYQRNQVGMVLRRIETKIPTVEELNLPPVIKTLAMTKRGIIIFVGATGTGKSTSLAAMIG
YRNLNSTGHIITIEDPIEFVHKHEGCIITQREVGIDTDSWEAALKNTLRQAPDVIMIGEVRTREGMDHAIAFAETGHLVL
CTLHANNANQAMDRIINFFPEDRRQQLLMDLSLNLKGVVAQQLIPTPDGKGRRVAMEILLGTPLVQDYIRDGEIHKLKEV
MKESVQLGMKTFDQALFELYQAGEISYEDALRYADSQNEVRLRIKLAQGGDAKTLAAGLDGVELAQVR

Nucleotide

• Length: 1167 bp

>NTDB_id=1066223 ACHZ97_RS15565 WP_396615646.1 3301983..3303149(-) (pilU) [Lysobacter soli strain P18]
ATGAGCACCAACACCAACGGCACTACGCCCGCCTCCACCGGCGCCATCGACTTCACGTCGTTCCTGAAGCTGATGGCGCA
CCAGAAGGCATCGGACCTGTTCATCACCGCGGGCATGCCGCCGTCGATGAAGGTGCACGGCAAGATCGCGCCGATCACGC
CCAACGCACTCACGCCGCAGCAGTCGCGCGACATGGTGCTGAACGTGATGAGCCCGCAGCAGCGCGAGGAGTTCGAGAAG
ACGCACGAGTGCAACTTCGCCATCGGCCTCGCGGGCGTTGGCCGCTTCCGCGTGAGCTGCTTCTACCAGCGCAACCAGGT
CGGCATGGTGCTTCGTCGCATCGAGACGAAGATCCCGACGGTGGAGGAACTGAACCTGCCGCCGGTGATCAAGACGCTGG
CGATGACCAAGCGCGGCATCATCATCTTCGTCGGCGCGACGGGCACGGGTAAGTCCACCTCGCTCGCGGCGATGATCGGC
TACCGCAACCTCAACTCGACGGGTCACATCATCACCATCGAAGACCCGATCGAATTCGTGCACAAGCACGAGGGCTGCAT
CATCACGCAGCGCGAAGTGGGCATCGACACCGACAGCTGGGAAGCGGCGCTGAAGAACACGCTGCGCCAGGCCCCGGACG
TGATCATGATCGGCGAGGTGCGCACGCGAGAAGGCATGGACCACGCCATCGCCTTCGCCGAGACCGGCCACCTGGTGCTG
TGCACGCTGCACGCCAACAACGCCAACCAGGCGATGGACCGCATCATCAACTTCTTCCCGGAAGACCGCCGCCAGCAGTT
GCTGATGGACTTGTCCCTGAACCTAAAGGGCGTGGTCGCGCAGCAGCTGATCCCGACGCCGGACGGCAAGGGGCGCCGCG
TGGCGATGGAAATCCTGCTGGGCACGCCGCTGGTGCAGGACTACATTCGCGATGGCGAGATCCACAAGCTCAAGGAAGTG
ATGAAGGAATCCGTGCAGCTGGGCATGAAGACCTTCGACCAGGCGCTGTTCGAGCTGTACCAGGCCGGCGAGATCTCCTA
CGAGGACGCGCTGCGCTACGCCGACTCGCAGAACGAAGTGCGCCTGCGCATCAAGCTCGCGCAGGGCGGCGACGCGAAGA
CGCTCGCGGCCGGGCTCGACGGCGTGGAGCTGGCGCAGGTCCGCTGA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (131-284)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilU	Pseudomonas stutzeri DSM 10701	67.751	95.103	0.644
pilU	Acinetobacter baylyi ADP1	64.146	92.01	0.59
pilU	Vibrio cholerae strain A1552	53.652	91.753	0.492
pilT	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	41.287	96.134	0.397