Detailed information NTG1066148

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: ACF0H7_RS30830
• Genome accession: NZ_CP172305
• Coordinates: 6617043..6618536 (+)
• Length: 497 a.a.
• NCBI ID: WP_397450559.1
• Uniprot ID: -
• Organism: Pseudomonas sp. NA-150
• Function: require for natural transformation (predicted from homology) Unclear

Genomic Context

Location: 6612043..6623536

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACF0H7_RS30805 (ACF0H7_30805)	sutA	6613389..6613718 (-)	330	WP_397450555.1	transcriptional regulator SutA	-
ACF0H7_RS30810 (ACF0H7_30810)	-	6613819..6614244 (-)	426	WP_397450556.1	secondary thiamine-phosphate synthase enzyme YjbQ	-
ACF0H7_RS30815 (ACF0H7_30815)	-	6614424..6615767 (-)	1344	WP_397450557.1	ammonium transporter	-
ACF0H7_RS30820 (ACF0H7_30820)	glnK	6615803..6616141 (-)	339	WP_002555808.1	P-II family nitrogen regulator	-
ACF0H7_RS30825 (ACF0H7_30825)	-	6616561..6616821 (+)	261	WP_397450558.1	accessory factor UbiK family protein	-
ACF0H7_RS30830 (ACF0H7_30830)	comM	6617043..6618536 (+)	1494	WP_397450559.1	YifB family Mg chelatase-like AAA ATPase	Machinery gene
ACF0H7_RS30835 (ACF0H7_30835)	-	6618787..6619647 (-)	861	WP_397454081.1	methyl-accepting chemotaxis protein	-
ACF0H7_RS30840 (ACF0H7_30840)	-	6619645..6620790 (-)	1146	Protein_6070	Cache 3/Cache 2 fusion domain-containing protein	-
ACF0H7_RS30845 (ACF0H7_30845)	-	6620958..6621878 (-)	921	WP_397450560.1	LysR substrate-binding domain-containing protein	-
ACF0H7_RS30850 (ACF0H7_30850)	-	6622034..6623431 (+)	1398	WP_397454083.1	NorM family multidrug efflux MATE transporter	-

Sequence

Protein

• Length: 497 a.a.
• Molecular weight: 53016.73 Da
• Isoelectric Point: 7.4908

>NTDB_id=1066148 ACF0H7_RS30830 WP_397450559.1 6617043..6618536(+) (comM) [Pseudomonas sp. NA-150]
MSLAIVLSRAQVGVEAPAVTVECHLANGLPALTLVGLPEGAVKESKDRVRSALLNSGFDYPARRITLNLAPADLPKDGGR
FDLAIALGLLAASGQLPAFALQDVECLGELALSGAIRAVQGVLPAALAARAAEHTLIVPTANAEEACLASGLRVIAVNDL
RELVAHFNGKAPIAPYESSGLLHVSKPYPDLNEVQGQSAAKRALLVAAAGAHNLLFSGPPGTGKTLLASRLPGLLPPLDE
HEALEVAAIQSVASQTTLTSWPQRPFRQPHHSASGAALVGGGSRPQPGEITLAHHGVLFLDELPEFDRKVLEVLREPLES
GHIVIARARDKVRFPARFQLVAAMNPCPCGYLGEPSGRCRCSTEQIQRYRNKLSGPLLDRIDLHLTVAREATALNPEPQT
GEDTATTAKLVAQARDRQNRRQGCANAFLDLKGLRKHCPLSSEDENWLETACERLTLSLRAAHRLLKVARTLADLEQVDA
IGRSHLAEALQYRPSSN

Nucleotide

• Length: 1494 bp

>NTDB_id=1066148 ACF0H7_RS30830 WP_397450559.1 6617043..6618536(+) (comM) [Pseudomonas sp. NA-150]
ATGTCGCTCGCCATCGTCCTCAGCCGCGCCCAGGTGGGTGTCGAAGCGCCTGCCGTTACCGTGGAGTGCCACTTGGCCAA
CGGCCTGCCCGCGTTGACGCTGGTGGGGCTGCCCGAGGGCGCGGTGAAGGAGAGCAAGGACCGGGTGCGCAGCGCATTGT
TGAATTCCGGCTTCGATTACCCGGCACGCCGGATCACGCTCAATCTTGCTCCCGCTGACTTGCCCAAGGACGGTGGTCGT
TTTGATTTGGCCATTGCCTTGGGTTTGCTCGCAGCCAGCGGCCAGTTGCCAGCGTTTGCGTTGCAGGATGTCGAATGCCT
GGGAGAGCTGGCGCTATCGGGCGCAATTCGAGCAGTGCAAGGCGTACTCCCTGCCGCGTTGGCTGCGCGGGCCGCCGAGC
ATACGTTGATCGTACCAACGGCCAATGCCGAGGAAGCCTGCCTGGCATCCGGGTTGCGAGTGATTGCCGTGAACGACTTG
CGCGAATTGGTGGCGCACTTCAACGGGAAAGCCCCGATTGCGCCCTACGAGTCCAGCGGACTCTTACACGTGAGCAAGCC
GTATCCGGATCTAAACGAAGTCCAGGGCCAGAGTGCCGCCAAGCGCGCATTGCTGGTGGCGGCTGCGGGCGCGCACAACC
TATTGTTCAGCGGACCGCCTGGCACCGGCAAGACGCTGCTCGCCAGTCGCCTGCCAGGCCTGCTGCCGCCGCTGGATGAG
CACGAAGCCTTGGAGGTCGCGGCGATTCAATCCGTAGCCAGCCAGACCACGCTGACCAGTTGGCCACAACGACCGTTTCG
CCAGCCGCACCACTCTGCATCCGGCGCGGCGCTGGTCGGTGGAGGCAGTCGTCCGCAACCCGGCGAAATCACCCTCGCCC
ACCACGGCGTATTGTTTCTCGATGAGCTGCCGGAGTTTGATCGCAAGGTGCTGGAGGTTTTGCGCGAGCCTCTGGAGTCC
GGCCATATCGTCATCGCCCGAGCTCGTGACAAAGTACGCTTCCCCGCCCGCTTTCAGTTAGTCGCGGCCATGAACCCCTG
CCCTTGCGGCTATTTGGGCGAACCCAGTGGCCGTTGTCGCTGTTCGACCGAACAGATCCAGCGCTATCGCAACAAGCTGT
CCGGCCCACTGCTTGACCGAATCGACCTGCACCTGACCGTCGCCCGCGAGGCCACCGCGCTCAATCCCGAGCCACAAACG
GGCGAAGACACCGCGACCACCGCCAAGTTGGTCGCCCAGGCCCGCGACCGGCAGAATCGTCGCCAAGGATGCGCCAACGC
CTTCCTCGACCTCAAGGGCCTGCGCAAACACTGCCCGTTATCCAGCGAAGACGAAAACTGGCTGGAAACCGCCTGCGAAC
GTTTGACCCTGTCGCTCAGGGCGGCGCATCGCTTGCTGAAAGTAGCGAGAACGCTGGCGGATCTGGAGCAGGTGGACGCG
ATTGGCCGTAGTCATTTGGCGGAGGCGTTGCAGTATCGACCGTCGAGCAATTGA

Domains

Predicted by InterproScan.

• Magnesium chelatase, subunit ChlI C-terminal (Mg_chelatase_C) (401-493)

• Magnesium chelatase, subunit ChlI (Mg_chelatase) (190-390)

• Subunit ChlI of Mg-chelatase (ChlI) (21-142)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Haemophilus influenzae Rd KW20	54.8	100	0.551
comM	Glaesserella parasuis strain SC1401	54.4	100	0.547
comM	Vibrio cholerae strain A1552	54.747	99.598	0.545
comM	Vibrio campbellii strain DS40M4	54.747	99.598	0.545
comM	Legionella pneumophila str. Paris	48.387	99.799	0.483
comM	Legionella pneumophila strain ERS1305867	48.387	99.799	0.483
RA0C_RS07335	Riemerella anatipestifer ATCC 11845 = DSM 15868	45.743	100	0.465