Detailed information NTG1065196

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: ACHWS2_RS08325
• Genome accession: NZ_CP172105
• Coordinates: 1765813..1766247 (-)
• Length: 144 a.a.
• NCBI ID: WP_014668227.1
• Uniprot ID: -
• Organism: Pasteurella multocida strain 680
• Function: type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1760813..1771247

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACHWS2_RS08295	-	1761377..1761646 (-)	270	WP_005722568.1	GNAT family N-acetyltransferase	-
ACHWS2_RS08300	yacG	1761646..1761849 (-)	204	WP_005719879.1	DNA gyrase inhibitor YacG	-
ACHWS2_RS08305	coaE	1761860..1762480 (-)	621	WP_005751078.1	dephospho-CoA kinase	-
ACHWS2_RS08310	-	1762495..1763217 (-)	723	WP_016534448.1	prepilin peptidase	-
ACHWS2_RS08315	-	1763217..1764428 (-)	1212	WP_014668225.1	type II secretion system F family protein	-
ACHWS2_RS08320	pilB	1764428..1765813 (-)	1386	WP_014668226.1	GspE/PulE family protein	Machinery gene
ACHWS2_RS08325	pilA	1765813..1766247 (-)	435	WP_014668227.1	prepilin peptidase-dependent pilin	Machinery gene
ACHWS2_RS08330	ampD	1766408..1766974 (+)	567	WP_014668228.1	1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD	-
ACHWS2_RS08335	rppH	1767560..1768027 (+)	468	Protein_1595	RNA pyrophosphohydrolase	-
ACHWS2_RS08340	-	1768159..1768953 (+)	795	WP_005719128.1	sulfite exporter TauE/SafE family protein	-
ACHWS2_RS08345	lgt	1768963..1769766 (+)	804	WP_014668230.1	prolipoprotein diacylglyceryl transferase	-
ACHWS2_RS08350	-	1769772..1770623 (+)	852	WP_014668231.1	thymidylate synthase	-
ACHWS2_RS08355	tadA	1770650..1771138 (+)	489	WP_016534447.1	tRNA adenosine(34) deaminase TadA	-

Sequence

Protein

• Length: 144 a.a.
• Molecular weight: 15084.52 Da
• Isoelectric Point: 9.1281

>NTDB_id=1065196 ACHWS2_RS08325 WP_014668227.1 1765813..1766247(-) (pilA) [Pasteurella multocida strain 680]
MKKAIFFSIKKGFTLIELMIVIAIIAILATIAVPSYQNYTKKAAISELLQAAAPYRAEVELCIYNTNSTTNCNAGSHGIR
ADAAASKKYLKAITVKAGVITVTGQGSLEGISYTLTPSGNAAQGVSWTVNCGAQSDIFPAGFCA

Nucleotide

• Length: 435 bp

>NTDB_id=1065196 ACHWS2_RS08325 WP_014668227.1 1765813..1766247(-) (pilA) [Pasteurella multocida strain 680]
ATGAAAAAAGCCATTTTCTTTTCGATTAAAAAAGGGTTTACGCTAATTGAATTAATGATTGTCATTGCCATTATTGCGAT
TTTAGCCACGATTGCCGTGCCATCTTATCAAAATTATACAAAAAAAGCGGCAATCTCTGAATTATTGCAAGCCGCTGCTC
CTTATCGTGCCGAGGTAGAACTTTGTATCTATAATACAAATAGTACAACGAATTGTAATGCAGGAAGTCATGGTATTCGT
GCTGATGCTGCAGCAAGTAAAAAATATTTAAAAGCCATCACGGTTAAAGCTGGGGTAATTACTGTCACTGGACAAGGGAG
CTTGGAAGGAATTAGCTATACGCTGACACCGAGTGGTAACGCTGCTCAAGGTGTTTCTTGGACAGTTAATTGTGGTGCTC
AATCTGACATTTTCCCAGCAGGATTTTGTGCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (10-32)

• Pilin (bacterial filament) (Pilin) (42-141)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Haemophilus influenzae 86-028NP	62.5	100	0.625
pilA	Haemophilus influenzae Rd KW20	60.417	100	0.604
pilA	Glaesserella parasuis strain SC1401	53.02	100	0.549
pilA/pilA1	Eikenella corrodens VA1	38.129	96.528	0.368