Detailed information NTG1061385

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: ACGB44_RS03460
• Genome accession: NZ_CP171478
• Coordinates: 767014..768078 (+)
• Length: 354 a.a.
• NCBI ID: WP_110778198.1
• Uniprot ID: -
• Organism: Stutzerimonas frequens strain RL-XB02
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 762014..773078

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACGB44_RS03445 (ACGB44_03445)	-	762138..762932 (+)	795	WP_394375452.1	thermonuclease family protein	-
ACGB44_RS03450 (ACGB44_03450)	-	763076..764344 (+)	1269	WP_102839582.1	malic enzyme-like NAD(P)-binding protein	-
ACGB44_RS03455 (ACGB44_03455)	-	764412..766832 (-)	2421	WP_316958969.1	penicillin-binding protein 1A	-
ACGB44_RS03460 (ACGB44_03460)	comM	767014..768078 (+)	1065	WP_110778198.1	pilus assembly protein PilM	Machinery gene
ACGB44_RS03465 (ACGB44_03465)	-	768078..768650 (+)	573	WP_063539613.1	PilN domain-containing protein	-
ACGB44_RS03470 (ACGB44_03470)	pilO	768647..769270 (+)	624	WP_200596014.1	type 4a pilus biogenesis protein PilO	-
ACGB44_RS03475 (ACGB44_03475)	pilP	769267..769794 (+)	528	WP_125868795.1	type 4a pilus biogenesis lipoprotein PilP	-
ACGB44_RS03480 (ACGB44_03480)	pilQ	769848..771938 (+)	2091	WP_316958970.1	type IV pilus secretin PilQ	Machinery gene
ACGB44_RS03485 (ACGB44_03485)	aroK	771944..772489 (+)	546	WP_316958971.1	shikimate kinase AroK	-

Sequence

Protein

• Length: 354 a.a.
• Molecular weight: 37768.18 Da
• Isoelectric Point: 4.6346

>NTDB_id=1061385 ACGB44_RS03460 WP_110778198.1 767014..768078(+) (comM) [Stutzerimonas frequens strain RL-XB02]
MLGLFTKKANTLLGIDISSTSVKLLELSRSGNRYRVEAYAVEPLPPNAVVEKNIAELEGVGQALQRVVAKAKTGCKSAVV
AVSGSAVITKTIEMDAGLSDEELENQLKIEADQYIPYPLEEVAIDFEVQGPAPRAPGRVEVLLAACRKENVEVREAALAL
AGLTAKVVDVEAYALERSYDLLAPQLGSAHGELTVAVVDIGATMTTLSVLHNGRTIYSREQLFGGRQLTEEIQRRYGLSQ
EEAGLAKKQGGLPDDYDSEVLLPFKEAVVQQVSRSLQFFFAAGQFHDVDCILLAGGTASIPGLDHLIQQKIGTQTLVANP
FADMALSSKVNAGALASDAPSLMIACGLALRSFD

Nucleotide

• Length: 1065 bp

>NTDB_id=1061385 ACGB44_RS03460 WP_110778198.1 767014..768078(+) (comM) [Stutzerimonas frequens strain RL-XB02]
GTGCTAGGGCTCTTCACTAAGAAAGCGAACACGCTGCTTGGGATCGATATCAGTTCGACCTCAGTCAAGCTTCTCGAATT
AAGTCGATCGGGGAACCGCTACCGGGTTGAGGCTTATGCGGTTGAGCCGCTCCCACCAAATGCCGTGGTCGAAAAGAACA
TCGCTGAACTGGAAGGCGTTGGCCAGGCTCTGCAACGTGTGGTCGCAAAGGCTAAGACCGGCTGCAAGTCAGCCGTGGTA
GCTGTCTCCGGTTCAGCGGTGATCACCAAGACGATCGAGATGGACGCCGGGCTGTCTGACGAGGAGCTGGAAAACCAGCT
GAAGATCGAAGCCGACCAATATATTCCCTATCCGTTGGAAGAGGTGGCGATCGACTTCGAGGTCCAGGGCCCCGCGCCGC
GTGCGCCCGGTCGGGTCGAGGTTCTGCTCGCTGCCTGTCGCAAGGAAAACGTCGAAGTGCGCGAGGCGGCACTGGCTCTG
GCCGGGCTCACCGCGAAGGTCGTTGATGTCGAGGCCTATGCGCTCGAGCGCTCCTATGATCTTCTGGCGCCGCAGTTGGG
GAGCGCGCATGGTGAACTGACCGTCGCTGTCGTGGATATCGGCGCAACGATGACGACTCTGAGCGTCCTGCATAACGGAC
GCACCATATACAGTCGTGAGCAATTGTTCGGGGGGCGGCAGCTGACGGAGGAAATCCAACGCCGTTATGGGCTGTCACAA
GAGGAGGCTGGCCTCGCTAAAAAGCAGGGAGGGCTTCCTGATGACTACGACAGTGAGGTTTTGCTTCCGTTCAAAGAAGC
GGTCGTTCAGCAGGTCTCACGCTCGCTGCAATTCTTCTTCGCTGCTGGGCAGTTTCATGATGTCGATTGCATTCTGCTTG
CTGGTGGAACGGCTTCCATCCCGGGGCTTGATCATCTCATTCAGCAGAAGATCGGCACCCAGACTCTAGTTGCCAATCCG
TTTGCCGATATGGCTTTGAGTAGCAAGGTCAACGCAGGCGCGCTGGCCAGTGATGCGCCCTCGCTGATGATTGCGTGTGG
GTTGGCGCTAAGGAGTTTCGACTGA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-353)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Acinetobacter nosocomialis M2	56.497	100	0.565
pilM	Acinetobacter baumannii D1279779	56.497	100	0.565
comM	Acinetobacter baylyi ADP1	53.672	100	0.537
pilM	Legionella pneumophila strain ERS1305867	46.893	100	0.469