Detailed information NTG1061242

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: ACGI6K_RS02055
• Genome accession: NZ_CP171449
• Coordinates: 401150..402214 (+)
• Length: 354 a.a.
• NCBI ID: WP_376944189.1
• Uniprot ID: -
• Organism: Azorhizophilus paspali strain ATCC 23833
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 396150..407214

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACGI6K_RS02040 (ACGI6K_02040)	rpmE	396404..396616 (+)	213	WP_376944193.1	50S ribosomal protein L31	-
ACGI6K_RS02045 (ACGI6K_02045)	-	397194..398462 (+)	1269	WP_376944191.1	malic enzyme-like NAD(P)-binding protein	-
ACGI6K_RS02050 (ACGI6K_02050)	-	398517..400976 (-)	2460	WP_394543342.1	penicillin-binding protein 1A	-
ACGI6K_RS02055 (ACGI6K_02055)	pilM	401150..402214 (+)	1065	WP_376944189.1	pilus assembly protein PilM	Machinery gene
ACGI6K_RS02060 (ACGI6K_02060)	-	402215..402874 (+)	660	WP_376944187.1	PilN domain-containing protein	-
ACGI6K_RS02065 (ACGI6K_02065)	pilO	402871..403491 (+)	621	WP_376944185.1	type 4a pilus biogenesis protein PilO	-
ACGI6K_RS02070 (ACGI6K_02070)	-	403488..404012 (+)	525	WP_376944183.1	pilus assembly protein PilP	-
ACGI6K_RS02075 (ACGI6K_02075)	pilQ	404065..406164 (+)	2100	WP_376944181.1	type IV pilus secretin PilQ	Machinery gene
ACGI6K_RS02080 (ACGI6K_02080)	aroK	406169..406687 (+)	519	WP_376944179.1	shikimate kinase AroK	-

Sequence

Protein

• Length: 354 a.a.
• Molecular weight: 37931.02 Da
• Isoelectric Point: 4.8188

>NTDB_id=1061242 ACGI6K_RS02055 WP_376944189.1 401150..402214(+) (pilM) [Azorhizophilus paspali strain ATCC 23833]
MLRLFNKQAGSLLGIDIGSTMVKLLELSRSRSGYRVEAYAVEPLPANAVVEKNIVDIDGVGQALSKVLARIGTGARRAAV
AVAGSVVITKVMEMDAGLSEEEMETQLTLEAEQYIPYPLEEVAIDFEVLGPLSRSPGRVEVLLVACRRESVKAREAVLAL
AGLTAGVVDIEAYAMERVCGLLIDRLGGDRSELTVAVVDIGATMMTLSVLNDGRILYNREQSFGGKQLTDEMQRRYGLSV
AEAGLAWQRAGLPADCDSVLLQPLKEAVVQQISRSLQFFFAAGRYDRVDCVLLAGGTAPLPGLDQLVEQKIGTRTLVANP
FAGMTLSPKVNAKALASDAPAMMVACGLAMRRFD

Nucleotide

• Length: 1065 bp

>NTDB_id=1061242 ACGI6K_RS02055 WP_376944189.1 401150..402214(+) (pilM) [Azorhizophilus paspali strain ATCC 23833]
GTGCTAAGGCTCTTCAACAAGCAGGCTGGTTCATTGCTGGGAATCGATATCGGTTCGACCATGGTCAAACTTCTCGAATT
GAGTCGTTCGAGGAGCGGCTATCGAGTCGAGGCCTATGCCGTTGAACCGCTGCCGGCCAATGCCGTGGTCGAGAAGAATA
TCGTCGATATCGATGGTGTCGGTCAGGCCCTGAGCAAGGTGCTGGCCAGGATCGGCACCGGAGCCCGGCGTGCCGCGGTG
GCCGTGGCCGGTTCCGTGGTGATCACTAAGGTCATGGAGATGGATGCCGGGCTTTCCGAAGAAGAAATGGAAACCCAGTT
GACGCTCGAGGCCGAACAATACATTCCCTACCCCCTCGAGGAAGTGGCGATCGATTTCGAGGTCCTGGGGCCGTTGTCGC
GCAGTCCGGGCCGGGTCGAAGTGTTGCTCGTCGCCTGCCGCAGGGAGAGCGTCAAGGCCCGCGAAGCGGTGCTGGCGCTG
GCAGGCCTGACAGCCGGGGTCGTCGATATCGAGGCTTATGCCATGGAGCGTGTCTGTGGGCTGCTAATCGATCGGTTGGG
GGGCGACCGGTCGGAGTTGACCGTGGCCGTCGTCGATATCGGCGCGACCATGATGACGCTCAGCGTGTTGAACGATGGAC
GCATCCTCTATAACCGCGAGCAATCGTTCGGCGGCAAGCAGCTCACCGACGAGATGCAGCGCCGTTACGGACTGTCCGTA
GCCGAAGCCGGCTTGGCCTGGCAAAGGGCTGGACTCCCGGCCGATTGCGACAGCGTGCTCCTGCAACCTCTCAAGGAGGC
TGTCGTACAGCAGATATCCCGCTCGCTGCAGTTCTTCTTCGCGGCGGGCCGGTACGACCGGGTCGACTGCGTCCTGCTGG
CCGGCGGGACCGCTCCCTTGCCGGGCCTCGACCAACTGGTCGAGCAGAAGATCGGCACCAGAACCCTGGTAGCCAATCCG
TTCGCCGGAATGACGCTGAGCCCCAAGGTGAATGCCAAGGCCTTGGCCAGCGACGCTCCGGCCATGATGGTCGCCTGTGG
CCTGGCGATGAGGCGCTTCGACTAG

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-353)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	50	100	0.503
comM	Acinetobacter nosocomialis M2	50	100	0.503
comM	Acinetobacter baylyi ADP1	49.153	100	0.492
pilM	Legionella pneumophila strain ERS1305867	40.96	100	0.41