Detailed information NTG1060879

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: ACGK9W_RS21045
• Genome accession: NZ_CP171359
• Coordinates: 4509016..4510077 (+)
• Length: 353 a.a.
• NCBI ID: WP_405418545.1
• Uniprot ID: -
• Organism: Marinobacter flavimaris strain ZYH30
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 4504016..4515077

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACGK9W_RS21030 (ACGK9W_21030)	rpmE	4504486..4504707 (+)	222	WP_064230272.1	50S ribosomal protein L31	-
ACGK9W_RS21035 (ACGK9W_21035)	-	4504959..4506224 (+)	1266	WP_064230271.1	malic enzyme-like NAD(P)-binding protein	-
ACGK9W_RS21040 (ACGK9W_21040)	-	4506292..4508820 (-)	2529	WP_405418543.1	penicillin-binding protein 1A	-
ACGK9W_RS21045 (ACGK9W_21045)	pilM	4509016..4510077 (+)	1062	WP_405418545.1	pilus assembly protein PilM	Machinery gene
ACGK9W_RS21050 (ACGK9W_21050)	-	4510077..4510640 (+)	564	WP_053114373.1	PilN domain-containing protein	-
ACGK9W_RS21055 (ACGK9W_21055)	-	4510640..4511251 (+)	612	WP_008170795.1	type 4a pilus biogenesis protein PilO	-
ACGK9W_RS21060 (ACGK9W_21060)	-	4511254..4511802 (+)	549	WP_008170793.1	pilus assembly protein PilP	-
ACGK9W_RS21065 (ACGK9W_21065)	pilQ	4511868..4513949 (+)	2082	WP_405418548.1	type IV pilus secretin PilQ	Machinery gene
ACGK9W_RS21070 (ACGK9W_21070)	aroK	4514086..4514652 (+)	567	WP_405418549.1	shikimate kinase AroK	-

Sequence

Protein

• Length: 353 a.a.
• Molecular weight: 37803.85 Da
• Isoelectric Point: 4.1786

>NTDB_id=1060879 ACGK9W_RS21045 WP_405418545.1 4509016..4510077(+) (pilM) [Marinobacter flavimaris strain ZYH30]
MFGLGKKSSAVLGVDISSSSVKLLELSKQGDRYKVESYAVEPLPANAVVEKNITDVEAVGEVMKRVASKSRSGVKQVAVA
VSGSAVITKVIQMDGGLNEFEMEDQIALEADHYIPYPLDEVAIDFEVQGPSESNPDQVDVLLAACRKENVDIREDALEIA
SLTTKVVDVEAYALERAYALIEPQLDSQGEELVVAIVDIGATMTTLSVLAGGKTVYTREQIFGGKQLTEEIQRRYGLSLE
EAGLAKKQGGLPDDYESEVLTPFREAVVQQVARALQFFFGASQYNAVDYVVLAGGTASIQGLTEMVEEKTGTPTMVANPF
ADMAVGSRVNASALSNDAPSLMIACGLAMRSFD

Nucleotide

• Length: 1062 bp

>NTDB_id=1060879 ACGK9W_RS21045 WP_405418545.1 4509016..4510077(+) (pilM) [Marinobacter flavimaris strain ZYH30]
GTGTTTGGATTAGGAAAGAAATCCAGTGCAGTGCTGGGCGTGGATATAAGCTCCAGCTCGGTCAAACTTCTGGAGCTGTC
AAAGCAGGGTGACCGTTATAAGGTCGAAAGCTACGCGGTGGAGCCGTTACCGGCCAATGCCGTGGTGGAAAAGAATATTA
CGGACGTTGAAGCAGTGGGCGAAGTGATGAAGCGAGTCGCTTCCAAGTCCCGCTCCGGCGTAAAGCAGGTAGCAGTTGCG
GTATCAGGTTCGGCGGTAATCACCAAGGTCATCCAGATGGACGGTGGCCTTAACGAATTCGAGATGGAAGATCAGATTGC
CCTGGAGGCCGATCACTATATTCCATACCCACTGGATGAAGTGGCCATCGATTTCGAAGTTCAGGGTCCCTCCGAAAGCA
ACCCCGACCAGGTAGATGTTCTTCTGGCTGCATGCCGAAAGGAAAATGTCGACATTCGAGAAGATGCGCTCGAGATCGCC
TCTCTGACGACCAAGGTGGTTGATGTCGAGGCCTACGCCCTTGAGCGCGCCTACGCGTTAATCGAGCCGCAGCTGGACTC
CCAGGGCGAGGAGTTGGTGGTGGCAATTGTTGATATTGGCGCGACCATGACCACGCTGAGCGTTCTGGCCGGCGGCAAAA
CCGTTTACACCCGCGAACAGATTTTTGGTGGCAAGCAACTGACCGAGGAAATCCAGCGCCGTTACGGTCTGTCTCTGGAA
GAGGCCGGGCTTGCCAAAAAACAGGGCGGACTGCCCGATGACTACGAATCCGAAGTGCTGACCCCGTTCCGCGAAGCCGT
GGTGCAGCAGGTGGCCCGAGCACTTCAGTTCTTCTTTGGCGCCAGTCAGTACAATGCTGTCGATTACGTGGTTCTGGCAG
GAGGCACTGCCTCGATTCAGGGGCTGACGGAGATGGTCGAAGAAAAGACGGGAACGCCGACAATGGTCGCGAATCCTTTT
GCAGATATGGCAGTAGGGTCACGGGTCAACGCATCGGCACTGAGTAATGATGCGCCTTCCCTGATGATTGCCTGCGGCCT
GGCAATGAGGAGCTTCGACTGA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (13-352)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	53.736	98.584	0.53
comM	Acinetobacter nosocomialis M2	53.736	98.584	0.53
comM	Acinetobacter baylyi ADP1	51.724	98.584	0.51
pilM	Legionella pneumophila strain ERS1305867	46.571	99.15	0.462