Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | O1Q83_RS01765 | Genome accession | NZ_CP170642 |
| Coordinates | 362573..363046 (+) | Length | 157 a.a. |
| NCBI ID | WP_132301912.1 | Uniprot ID | A0A4R1KWB2 |
| Organism | Lonepinella koalarum strain ACM3666 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 357573..368046
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| O1Q83_RS01740 (O1Q83_00347) | - | 359343..359564 (-) | 222 | WP_132301922.1 | YejL family protein | - |
| O1Q83_RS01745 (O1Q83_00348) | yejK | 359673..360692 (+) | 1020 | WP_132301920.1 | nucleoid-associated protein YejK | - |
| O1Q83_RS01750 (O1Q83_00349) | bamE | 360755..361171 (+) | 417 | WP_132301918.1 | outer membrane protein assembly factor BamE | - |
| O1Q83_RS01755 (O1Q83_00350) | - | 361250..361900 (-) | 651 | WP_132301916.1 | HAD family phosphatase | - |
| O1Q83_RS01760 (O1Q83_00351) | ampD | 361904..362449 (-) | 546 | WP_132301914.1 | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | - |
| O1Q83_RS01765 (O1Q83_00352) | pilA | 362573..363046 (+) | 474 | WP_132301912.1 | prepilin peptidase-dependent pilin | Machinery gene |
| O1Q83_RS01770 (O1Q83_00353) | pilB | 363049..364461 (+) | 1413 | WP_132301910.1 | GspE/PulE family protein | Machinery gene |
| O1Q83_RS01775 (O1Q83_00354) | pilC | 364458..365678 (+) | 1221 | WP_132301908.1 | type II secretion system F family protein | Machinery gene |
| O1Q83_RS01780 (O1Q83_00355) | - | 365675..366373 (+) | 699 | WP_132301906.1 | A24 family peptidase | - |
| O1Q83_RS01785 (O1Q83_00356) | coaE | 366399..367028 (+) | 630 | WP_132301904.1 | dephospho-CoA kinase | - |
| O1Q83_RS01790 (O1Q83_00357) | yacG | 367012..367212 (+) | 201 | WP_132301902.1 | DNA gyrase inhibitor YacG | - |
| O1Q83_RS01795 (O1Q83_00358) | - | 367215..367481 (+) | 267 | WP_132301900.1 | GNAT family N-acetyltransferase | - |
Sequence
Protein
Download Length: 157 a.a. Molecular weight: 16442.51 Da Isoelectric Point: 8.1094
>NTDB_id=1058277 O1Q83_RS01765 WP_132301912.1 362573..363046(+) (pilA) [Lonepinella koalarum strain ACM3666]
MNFSYTSHNISFKKGFTLIELMIVIAIVAILATIAIPSYQNYTKKAAISELLQAAAPYRSEVELCVYNQDAVKNCSGGQH
GIQANTTTAKGKYVKSVSVASGVITVTGNGSVSDVSYTLTASGSAKEGVTWTANCGSNTELFPSGFCSTSTNTSTSN
MNFSYTSHNISFKKGFTLIELMIVIAIVAILATIAIPSYQNYTKKAAISELLQAAAPYRSEVELCVYNQDAVKNCSGGQH
GIQANTTTAKGKYVKSVSVASGVITVTGNGSVSDVSYTLTASGSAKEGVTWTANCGSNTELFPSGFCSTSTNTSTSN
Nucleotide
Download Length: 474 bp
>NTDB_id=1058277 O1Q83_RS01765 WP_132301912.1 362573..363046(+) (pilA) [Lonepinella koalarum strain ACM3666]
ATGAATTTTAGCTACACTTCACACAACATTTCATTCAAAAAAGGTTTTACCCTCATTGAATTAATGATCGTCATCGCTAT
CGTCGCCATTTTAGCCACTATTGCTATTCCGTCTTATCAAAATTATACCAAAAAAGCAGCCATTTCTGAATTATTGCAGG
CTGCTGCGCCCTATCGCTCGGAAGTTGAACTTTGTGTATATAATCAAGATGCTGTTAAGAATTGCTCAGGTGGTCAACAT
GGTATTCAAGCCAATACTACAACAGCAAAAGGCAAATATGTAAAATCTGTTTCGGTGGCGAGTGGGGTAATTACGGTGAC
TGGTAATGGTAGTGTAAGTGATGTGAGTTACACATTAACTGCTAGTGGTTCTGCTAAAGAGGGCGTCACTTGGACGGCAA
ACTGTGGTTCAAATACTGAATTATTCCCATCGGGTTTTTGTAGCACAAGCACGAATACTAGCACGAGTAACTAG
ATGAATTTTAGCTACACTTCACACAACATTTCATTCAAAAAAGGTTTTACCCTCATTGAATTAATGATCGTCATCGCTAT
CGTCGCCATTTTAGCCACTATTGCTATTCCGTCTTATCAAAATTATACCAAAAAAGCAGCCATTTCTGAATTATTGCAGG
CTGCTGCGCCCTATCGCTCGGAAGTTGAACTTTGTGTATATAATCAAGATGCTGTTAAGAATTGCTCAGGTGGTCAACAT
GGTATTCAAGCCAATACTACAACAGCAAAAGGCAAATATGTAAAATCTGTTTCGGTGGCGAGTGGGGTAATTACGGTGAC
TGGTAATGGTAGTGTAAGTGATGTGAGTTACACATTAACTGCTAGTGGTTCTGCTAAAGAGGGCGTCACTTGGACGGCAA
ACTGTGGTTCAAATACTGAATTATTCCCATCGGGTTTTTGTAGCACAAGCACGAATACTAGCACGAGTAACTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Haemophilus influenzae 86-028NP |
63.38 |
90.446 |
0.573 |
| pilA | Haemophilus influenzae Rd KW20 |
62.676 |
90.446 |
0.567 |
| pilA | Glaesserella parasuis strain SC1401 |
54.348 |
87.898 |
0.478 |