Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   ACFJIW_RS08990 Genome accession   NZ_CP170554
Coordinates   2184979..2185347 (+) Length   122 a.a.
NCBI ID   WP_243746142.1    Uniprot ID   -
Organism   Tahibacter sp. UC22_41     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 2179979..2190347
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACFJIW_RS08965 (ACFJIW_08965) - 2180634..2181584 (-) 951 WP_386070756.1 aspartate carbamoyltransferase catalytic subunit -
  ACFJIW_RS08970 (ACFJIW_08970) ruvX 2181581..2182000 (-) 420 WP_386070757.1 Holliday junction resolvase RuvX -
  ACFJIW_RS08975 (ACFJIW_08975) - 2182086..2182652 (-) 567 WP_386070758.1 YqgE/AlgH family protein -
  ACFJIW_RS08980 (ACFJIW_08980) - 2182829..2183692 (-) 864 WP_386070759.1 TonB family protein -
  ACFJIW_RS08985 (ACFJIW_08985) gshB 2183689..2184636 (-) 948 WP_386070760.1 glutathione synthase -
  ACFJIW_RS08990 (ACFJIW_08990) pilG 2184979..2185347 (+) 369 WP_243746142.1 twitching motility response regulator PilG Regulator
  ACFJIW_RS08995 (ACFJIW_08995) - 2185401..2185766 (+) 366 WP_257386657.1 PleD family two-component system response regulator -
  ACFJIW_RS09000 (ACFJIW_09000) - 2185778..2186332 (+) 555 WP_386070761.1 chemotaxis protein CheW -
  ACFJIW_RS09005 (ACFJIW_09005) - 2186393..2188426 (+) 2034 WP_386070762.1 methyl-accepting chemotaxis protein -
  ACFJIW_RS09010 (ACFJIW_09010) - 2188466..2189338 (+) 873 WP_386070763.1 CheR family methyltransferase -

Sequence

Protein


Download         Length: 122 a.a.        Molecular weight: 13707.03 Da        Isoelectric Point: 9.5753

>NTDB_id=1057961 ACFJIW_RS08990 WP_243746142.1 2184979..2185347(+) (pilG) [Tahibacter sp. UC22_41]
MKVMVIDDSKTIRRTAETLLKKEGADVVTATDGFEALAKISDHQPHIIFVDIMMPRLDGYQTCALIKNNQMFKGTPVIML
SSKDGLFDKARGRIVGSEQYLTKPFTREELLGAIRRHVDLKA

Nucleotide


Download         Length: 369 bp        

>NTDB_id=1057961 ACFJIW_RS08990 WP_243746142.1 2184979..2185347(+) (pilG) [Tahibacter sp. UC22_41]
ATGAAGGTGATGGTCATCGACGACTCCAAGACCATACGCCGCACGGCCGAGACGCTGCTGAAAAAGGAAGGCGCCGACGT
CGTCACCGCGACCGACGGCTTTGAGGCGTTGGCGAAGATCTCCGATCACCAGCCGCACATCATTTTCGTCGACATCATGA
TGCCGCGGCTCGACGGGTATCAGACCTGCGCCCTCATCAAGAACAACCAGATGTTCAAGGGCACGCCGGTGATCATGCTG
TCGTCCAAGGACGGTCTGTTCGACAAGGCCCGCGGCCGCATCGTCGGCTCGGAACAGTATTTGACCAAACCGTTTACCCG
GGAAGAGCTCCTCGGCGCGATCCGGCGTCACGTGGATCTGAAGGCGTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(3-114)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.576

96.721

0.721
  vicR Streptococcus mutans UA159

41.026

95.902

0.393
  pilH Synechocystis sp. PCC 6803

40.351

93.443

0.377
  chpA Acinetobacter baumannii strain A118

39.286

91.803

0.361
  micA Streptococcus pneumoniae Cp1015

38.596

93.443

0.361

Multiple sequence alignment