Detailed information NTG1057791

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: ACFJY4_RS19125
• Genome accession: NZ_CP170500
• Coordinates: 4039673..4040737 (-)
• Length: 354 a.a.
• NCBI ID: WP_340065837.1
• Uniprot ID: -
• Organism: Stutzerimonas stutzeri strain MBI-RS3
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 4034673..4045737

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACFJY4_RS19100 (ACFJY4_19095)	aroK	4035199..4035744 (-)	546	WP_020307762.1	shikimate kinase AroK	-
ACFJY4_RS19105 (ACFJY4_19100)	pilQ	4035750..4037900 (-)	2151	WP_020307761.1	type IV pilus secretin PilQ	Machinery gene
ACFJY4_RS19110 (ACFJY4_19105)	pilP	4037954..4038481 (-)	528	WP_014595707.1	type 4a pilus biogenesis lipoprotein PilP	-
ACFJY4_RS19115 (ACFJY4_19110)	pilO	4038478..4039104 (-)	627	WP_020307760.1	type 4a pilus biogenesis protein PilO	-
ACFJY4_RS19120 (ACFJY4_19115)	pilN	4039101..4039673 (-)	573	WP_386413702.1	type 4a pilus biogenesis protein PilN	-
ACFJY4_RS19125 (ACFJY4_19120)	comM	4039673..4040737 (-)	1065	WP_340065837.1	pilus assembly protein PilM	Machinery gene
ACFJY4_RS19130 (ACFJY4_19125)	-	4040917..4043340 (+)	2424	WP_340065835.1	penicillin-binding protein 1A	-
ACFJY4_RS19135 (ACFJY4_19130)	-	4043406..4044674 (-)	1269	WP_011911783.1	malic enzyme-like NAD(P)-binding protein	-
ACFJY4_RS19140 (ACFJY4_19135)	-	4044816..4045610 (-)	795	WP_340065832.1	thermonuclease family protein	-

Sequence

Protein

• Length: 354 a.a.
• Molecular weight: 37790.31 Da
• Isoelectric Point: 4.6880

>NTDB_id=1057791 ACFJY4_RS19125 WP_340065837.1 4039673..4040737(-) (comM) [Stutzerimonas stutzeri strain MBI-RS3]
MLGLFTKKANTLLGIDISSTSVKLLELSRSGNRYRVEAYAVEPLPPNAVVEKNIAELEGVGQALQRVVAKAKTGCKSAVV
AVSGSAVITKMIEMDAGLSDEELENQLKIEADQYIPYPLEEVAIDFEVQGPAPRAPGRVEVLLAACRKENVEIREAALAL
AGLTAKVVDVEAYALERSYGLLASQLGTGHGELTVAVVDIGATMTTLSVLHNGRTIYTREQLFGGRQLTEEIQRRYGLSQ
EEAGLAKKQGGLPDDYDSEVLLPFKEAVVQQVSRSLQFFFAAGQFHDVDCILLAGGTASIPSLDHMIQQKIGTQTLVANP
FADMALSSKVNAGALASDAPALMIACGLALRSFD

Nucleotide

• Length: 1065 bp

>NTDB_id=1057791 ACFJY4_RS19125 WP_340065837.1 4039673..4040737(-) (comM) [Stutzerimonas stutzeri strain MBI-RS3]
GTGCTAGGGCTCTTCACTAAGAAAGCGAACACGCTGCTTGGGATCGATATCAGTTCGACCTCAGTCAAGCTCCTCGAATT
AAGTCGATCGGGTAATCGGTACCGCGTCGAGGCTTATGCCGTCGAGCCGCTACCGCCGAATGCCGTCGTCGAAAAGAACA
TCGCCGAACTTGAGGGTGTCGGTCAGGCCCTGCAGCGAGTCGTCGCCAAAGCCAAGACCGGCTGCAAGTCCGCTGTTGTC
GCTGTCTCCGGGTCTGCCGTCATCACGAAGATGATTGAGATGGATGCCGGGCTTTCTGATGAAGAGCTCGAGAATCAGCT
CAAGATCGAGGCGGATCAGTACATCCCCTACCCACTGGAGGAAGTCGCGATCGACTTCGAGGTGCAAGGTCCTGCGCCTC
GCGCGCCTGGCAGGGTAGAAGTTCTCCTCGCCGCTTGCCGTAAGGAGAATGTCGAGATCCGTGAAGCCGCGCTGGCCTTG
GCCGGGCTTACCGCCAAAGTGGTGGATGTCGAGGCCTATGCGCTTGAGCGCTCCTACGGATTGCTCGCTTCACAGTTGGG
TACAGGGCACGGCGAGCTGACCGTCGCCGTCGTCGACATCGGCGCGACCATGACAACCCTGAGCGTGCTGCATAACGGGC
GTACCATCTACACGCGCGAGCAGCTGTTCGGTGGTCGTCAACTGACCGAAGAGATCCAGCGCCGCTACGGTCTGTCTCAG
GAAGAAGCCGGCCTTGCCAAGAAGCAAGGTGGTCTCCCAGATGACTACGACAGTGAAGTCCTGCTTCCGTTCAAGGAGGC
GGTGGTGCAGCAGGTATCCCGCTCGTTGCAGTTCTTCTTCGCTGCAGGGCAGTTCCACGACGTCGACTGCATCCTGCTCG
CGGGCGGAACGGCCTCCATTCCGAGTCTTGATCACATGATTCAGCAGAAGATCGGAACGCAAACTCTAGTGGCCAATCCT
TTCGCCGATATGGCTTTGAGCAGCAAGGTGAACGCCGGGGCGCTGGCCAGTGATGCGCCTGCATTAATGATTGCATGCGG
TTTGGCGCTGAGGAGCTTCGACTGA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-353)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Acinetobacter nosocomialis M2	55.65	100	0.557
pilM	Acinetobacter baumannii D1279779	55.65	100	0.557
comM	Acinetobacter baylyi ADP1	53.107	100	0.531
pilM	Legionella pneumophila strain ERS1305867	46.045	100	0.46