Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | ACEQUB_RS02715 | Genome accession | NZ_CP170451 |
| Coordinates | 546430..546951 (+) | Length | 173 a.a. |
| NCBI ID | WP_197332583.1 | Uniprot ID | G3A5Q2 |
| Organism | Ralstonia syzygii strain Br19 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 541430..551951
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACEQUB_RS02700 (ACEQUB_00525) | sucD | 542649..543530 (+) | 882 | WP_197332581.1 | succinate--CoA ligase subunit alpha | - |
| ACEQUB_RS02705 (ACEQUB_00526) | ltrA | 543986..545354 (+) | 1369 | Protein_537 | group II intron reverse transcriptase/maturase | - |
| ACEQUB_RS02710 (ACEQUB_00527) | - | 545542..546240 (+) | 699 | WP_197332582.1 | TerC family protein | - |
| ACEQUB_RS02715 (ACEQUB_00528) | pilA | 546430..546951 (+) | 522 | WP_197332583.1 | pilin | Machinery gene |
| ACEQUB_RS02720 (ACEQUB_00529) | pilA | 547219..547731 (+) | 513 | WP_197330892.1 | pilin | Machinery gene |
| ACEQUB_RS02725 (ACEQUB_00530) | - | 547816..549546 (+) | 1731 | WP_197332584.1 | PglL family O-oligosaccharyltransferase | - |
| ACEQUB_RS02730 | - | 549813..550719 (-) | 907 | Protein_542 | IS481 family transposase | - |
| ACEQUB_RS02735 (ACEQUB_00532) | - | 550815..551579 (-) | 765 | WP_390622889.1 | ISL3 family transposase | - |
| ACEQUB_RS02740 (ACEQUB_00533) | - | 551576..551851 (-) | 276 | WP_390622890.1 | transposase family protein | - |
Sequence
Protein
Download Length: 173 a.a. Molecular weight: 17671.28 Da Isoelectric Point: 9.5797
>NTDB_id=1057509 ACEQUB_RS02715 WP_197332583.1 546430..546951(+) (pilA) [Ralstonia syzygii strain Br19]
MASKHSGSRLRGQRGFTLIELMIVVAIIGILAAIAIPAYQDYTIRSRVVEGLSLAAQAKALVVENAANAQSSLAQGASTL
QVDRNVSALNINSTTGEIAVVFTSAVAGTGANTLVLTPYSGNSSSVANLQAGSAPPGMVLWVCAAAGKAMPVNTVTQQTT
ATLPPKYAPSECR
MASKHSGSRLRGQRGFTLIELMIVVAIIGILAAIAIPAYQDYTIRSRVVEGLSLAAQAKALVVENAANAQSSLAQGASTL
QVDRNVSALNINSTTGEIAVVFTSAVAGTGANTLVLTPYSGNSSSVANLQAGSAPPGMVLWVCAAAGKAMPVNTVTQQTT
ATLPPKYAPSECR
Nucleotide
Download Length: 522 bp
>NTDB_id=1057509 ACEQUB_RS02715 WP_197332583.1 546430..546951(+) (pilA) [Ralstonia syzygii strain Br19]
ATGGCATCGAAGCACAGTGGGAGCAGGCTGCGCGGCCAGCGCGGCTTTACGTTGATCGAGTTGATGATCGTGGTCGCGAT
CATCGGGATCTTGGCGGCGATTGCGATTCCGGCGTATCAGGACTACACCATTCGGTCGCGGGTGGTTGAGGGGCTGTCGC
TGGCCGCGCAGGCCAAGGCGCTGGTGGTTGAGAATGCAGCCAACGCGCAGAGCAGTCTGGCGCAAGGCGCCTCGACGTTG
CAGGTCGACAGGAACGTCAGCGCTTTGAATATCAACTCGACTACGGGCGAGATAGCCGTGGTCTTCACGTCTGCTGTTGC
GGGTACGGGAGCGAATACGCTGGTATTGACCCCGTACTCCGGAAACTCTTCCTCGGTTGCAAACTTGCAGGCGGGTTCGG
CGCCGCCAGGAATGGTGCTGTGGGTATGTGCTGCCGCCGGCAAGGCAATGCCAGTCAATACTGTCACCCAGCAAACGACG
GCTACGTTGCCACCGAAATACGCGCCCTCGGAGTGTCGTTGA
ATGGCATCGAAGCACAGTGGGAGCAGGCTGCGCGGCCAGCGCGGCTTTACGTTGATCGAGTTGATGATCGTGGTCGCGAT
CATCGGGATCTTGGCGGCGATTGCGATTCCGGCGTATCAGGACTACACCATTCGGTCGCGGGTGGTTGAGGGGCTGTCGC
TGGCCGCGCAGGCCAAGGCGCTGGTGGTTGAGAATGCAGCCAACGCGCAGAGCAGTCTGGCGCAAGGCGCCTCGACGTTG
CAGGTCGACAGGAACGTCAGCGCTTTGAATATCAACTCGACTACGGGCGAGATAGCCGTGGTCTTCACGTCTGCTGTTGC
GGGTACGGGAGCGAATACGCTGGTATTGACCCCGTACTCCGGAAACTCTTCCTCGGTTGCAAACTTGCAGGCGGGTTCGG
CGCCGCCAGGAATGGTGCTGTGGGTATGTGCTGCCGCCGGCAAGGCAATGCCAGTCAATACTGTCACCCAGCAAACGACG
GCTACGTTGCCACCGAAATACGCGCCCTCGGAGTGTCGTTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Ralstonia pseudosolanacearum GMI1000 |
53.757 |
100 |
0.538 |
| pilA2 | Legionella pneumophila str. Paris |
45.455 |
95.376 |
0.434 |
| pilA2 | Legionella pneumophila strain ERS1305867 |
44.848 |
95.376 |
0.428 |
| comP | Acinetobacter baylyi ADP1 |
40.223 |
100 |
0.416 |
| pilE | Neisseria elongata subsp. glycolytica ATCC 29315 |
37.566 |
100 |
0.41 |