Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | ACFIOM_RS06105 | Genome accession | NZ_CP170425 |
| Coordinates | 1239627..1240097 (+) | Length | 156 a.a. |
| NCBI ID | WP_033842379.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus strain t197 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1234627..1245097
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACFIOM_RS06075 | - | 1235269..1235430 (+) | 162 | WP_000048121.1 | DUF1270 family protein | - |
| ACFIOM_RS06080 | - | 1235522..1235782 (+) | 261 | WP_000291075.1 | DUF1108 family protein | - |
| ACFIOM_RS06085 | - | 1235791..1236054 (+) | 264 | WP_001205732.1 | hypothetical protein | - |
| ACFIOM_RS06090 | - | 1236063..1238006 (+) | 1944 | WP_410531887.1 | AAA family ATPase | - |
| ACFIOM_RS06095 | - | 1238008..1238928 (+) | 921 | WP_000138475.1 | recombinase RecT | - |
| ACFIOM_RS06100 | - | 1239009..1239626 (+) | 618 | WP_073394849.1 | MBL fold metallo-hydrolase | - |
| ACFIOM_RS06105 | ssbA | 1239627..1240097 (+) | 471 | WP_033842379.1 | single-stranded DNA-binding protein | Machinery gene |
| ACFIOM_RS06110 | - | 1240127..1241011 (+) | 885 | WP_031833239.1 | DnaD domain protein | - |
| ACFIOM_RS06115 | - | 1241018..1241236 (+) | 219 | WP_000338530.1 | hypothetical protein | - |
| ACFIOM_RS06120 | - | 1241245..1241649 (+) | 405 | WP_058342511.1 | RusA family crossover junction endodeoxyribonuclease | - |
| ACFIOM_RS06125 | - | 1241662..1242030 (+) | 369 | WP_410531889.1 | SA1788 family PVL leukocidin-associated protein | - |
| ACFIOM_RS06130 | - | 1242034..1242276 (+) | 243 | WP_000131370.1 | SAV1978 family virulence-associated passenger protein | - |
| ACFIOM_RS06135 | - | 1242290..1242691 (+) | 402 | WP_000695762.1 | hypothetical protein | - |
| ACFIOM_RS06140 | - | 1242688..1243035 (+) | 348 | WP_410531891.1 | YopX family protein | - |
| ACFIOM_RS06145 | - | 1243032..1243340 (+) | 309 | WP_058342510.1 | hypothetical protein | - |
| ACFIOM_RS06150 | - | 1243333..1243569 (+) | 237 | WP_058342509.1 | DUF1024 family protein | - |
| ACFIOM_RS06155 | - | 1243574..1243747 (+) | 174 | WP_000028423.1 | hypothetical protein | - |
| ACFIOM_RS06160 | - | 1243748..1243909 (+) | 162 | WP_000889680.1 | hypothetical protein | - |
| ACFIOM_RS06165 | - | 1243924..1244451 (+) | 528 | WP_001061837.1 | dUTPase | - |
| ACFIOM_RS06170 | - | 1244488..1244733 (+) | 246 | WP_001282074.1 | hypothetical protein | - |
| ACFIOM_RS06175 | - | 1244730..1244936 (+) | 207 | WP_000195810.1 | DUF1381 domain-containing protein | - |
Sequence
Protein
Download Length: 156 a.a. Molecular weight: 17747.60 Da Isoelectric Point: 4.7821
>NTDB_id=1057139 ACFIOM_RS06105 WP_033842379.1 1239627..1240097(+) (ssbA) [Staphylococcus aureus strain t197]
MINRTILVGRLTRDPELRTTQSGVNVASFTLAVNRTFTNAQGEREADFINIIVFKKQAENVNKYLSKGSLTGVDGRLQTR
NYENKEGQRVYVTEVIADSIQFLEPKNSNDTQQDLYQQQAQQSRGQSQYPYNKPVKDNPFANANDPIEIDDDDLPF
MINRTILVGRLTRDPELRTTQSGVNVASFTLAVNRTFTNAQGEREADFINIIVFKKQAENVNKYLSKGSLTGVDGRLQTR
NYENKEGQRVYVTEVIADSIQFLEPKNSNDTQQDLYQQQAQQSRGQSQYPYNKPVKDNPFANANDPIEIDDDDLPF
Nucleotide
Download Length: 471 bp
>NTDB_id=1057139 ACFIOM_RS06105 WP_033842379.1 1239627..1240097(+) (ssbA) [Staphylococcus aureus strain t197]
ATGATAAACAGAACAATATTAGTTGGTCGTTTAACTAGAGACCCAGAATTAAGGACCACTCAAAGTGGTGTAAATGTAGC
ATCATTCACATTAGCAGTTAACCGCACATTTACGAATGCACAAGGAGAGCGCGAGGCAGACTTTATTAATATCATCGTAT
TTAAAAAACAAGCAGAGAACGTTAATAAATACCTATCTAAAGGATCGTTGACGGGCGTAGATGGTAGGTTACAAACGCGG
AATTATGAAAATAAGGAAGGTCAACGTGTATATGTTACGGAAGTTATTGCTGATAGTATTCAATTTTTAGAACCGAAAAA
CTCAAATGACACTCAACAAGATTTATACCAACAACAAGCGCAACAATCACGTGGACAGTCTCAATATCCATATAACAAAC
CAGTAAAAGATAATCCGTTCGCAAATGCGAATGATCCTATTGAAATAGATGACGATGATTTACCATTCTAA
ATGATAAACAGAACAATATTAGTTGGTCGTTTAACTAGAGACCCAGAATTAAGGACCACTCAAAGTGGTGTAAATGTAGC
ATCATTCACATTAGCAGTTAACCGCACATTTACGAATGCACAAGGAGAGCGCGAGGCAGACTTTATTAATATCATCGTAT
TTAAAAAACAAGCAGAGAACGTTAATAAATACCTATCTAAAGGATCGTTGACGGGCGTAGATGGTAGGTTACAAACGCGG
AATTATGAAAATAAGGAAGGTCAACGTGTATATGTTACGGAAGTTATTGCTGATAGTATTCAATTTTTAGAACCGAAAAA
CTCAAATGACACTCAACAAGATTTATACCAACAACAAGCGCAACAATCACGTGGACAGTCTCAATATCCATATAACAAAC
CAGTAAAAGATAATCCGTTCGCAAATGCGAATGATCCTATTGAAATAGATGACGATGATTTACCATTCTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
54.802 |
100 |
0.622 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
52.353 |
100 |
0.571 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
59.434 |
67.949 |
0.404 |
| ssb | Neisseria meningitidis MC58 |
33.526 |
100 |
0.372 |
| ssb | Neisseria gonorrhoeae MS11 |
33.526 |
100 |
0.372 |