Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | ACFC2F_RS12200 | Genome accession | NZ_CP170190 |
| Coordinates | 2518898..2519422 (-) | Length | 174 a.a. |
| NCBI ID | WP_008503384.1 | Uniprot ID | A0A156LWB5 |
| Organism | Enterobacter sichuanensis strain B36 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 2513898..2524422
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACFC2F_RS12185 (ACFC2F_12185) | - | 2514123..2515688 (-) | 1566 | WP_025757851.1 | EAL domain-containing protein | - |
| ACFC2F_RS12190 (ACFC2F_12190) | - | 2516028..2517428 (-) | 1401 | WP_379931360.1 | GGDEF domain-containing protein | - |
| ACFC2F_RS12195 (ACFC2F_12195) | - | 2517922..2518203 (+) | 282 | WP_025757848.1 | YjcB family protein | - |
| ACFC2F_RS12200 (ACFC2F_12200) | ssb | 2518898..2519422 (-) | 525 | WP_008503384.1 | single-stranded DNA-binding protein SSB1 | Machinery gene |
| ACFC2F_RS12205 (ACFC2F_12205) | uvrA | 2519674..2522496 (+) | 2823 | WP_045285551.1 | excinuclease ABC subunit UvrA | - |
| ACFC2F_RS12210 (ACFC2F_12210) | - | 2522500..2522853 (-) | 354 | WP_025757844.1 | MmcQ/YjbR family DNA-binding protein | - |
| ACFC2F_RS12215 (ACFC2F_12215) | - | 2522856..2523272 (-) | 417 | WP_379931361.1 | secondary thiamine-phosphate synthase enzyme YjbQ | - |
| ACFC2F_RS12220 (ACFC2F_12220) | aphA | 2523386..2524099 (-) | 714 | WP_047957545.1 | acid phosphatase AphA | - |
Sequence
Protein
Download Length: 174 a.a. Molecular weight: 18593.60 Da Isoelectric Point: 5.2456
>NTDB_id=1055471 ACFC2F_RS12200 WP_008503384.1 2518898..2519422(-) (ssb) [Enterobacter sichuanensis strain B36]
MASRGVNKVILVGNLGQDPEVRYMPSGGAVANITLATSESWRDKATGEMKEQTEWHRVVLFGKLAEVAGEYLRKGSQVYI
EGQLRTRKWTDQSGAEKYTTEVVVNVGGTMQMLGGRQGGGAPAGGGQQQGGWGQPQQPQGGNQFSGGAQSRPQQQSAPAP
SNEPPMDFDDDIPF
MASRGVNKVILVGNLGQDPEVRYMPSGGAVANITLATSESWRDKATGEMKEQTEWHRVVLFGKLAEVAGEYLRKGSQVYI
EGQLRTRKWTDQSGAEKYTTEVVVNVGGTMQMLGGRQGGGAPAGGGQQQGGWGQPQQPQGGNQFSGGAQSRPQQQSAPAP
SNEPPMDFDDDIPF
Nucleotide
Download Length: 525 bp
>NTDB_id=1055471 ACFC2F_RS12200 WP_008503384.1 2518898..2519422(-) (ssb) [Enterobacter sichuanensis strain B36]
ATGGCCAGCAGAGGCGTAAACAAGGTGATTCTCGTCGGTAATCTGGGCCAGGACCCGGAAGTACGCTACATGCCGAGTGG
TGGCGCAGTTGCCAACATTACGCTGGCTACTTCCGAATCCTGGCGTGATAAAGCGACCGGTGAGATGAAAGAGCAGACCG
AATGGCACCGCGTTGTGCTGTTTGGCAAACTGGCAGAAGTGGCCGGTGAGTATCTGCGTAAAGGTTCTCAGGTGTATATC
GAAGGCCAGCTGCGTACCCGCAAATGGACCGATCAGTCCGGAGCTGAGAAGTACACCACTGAAGTGGTGGTTAACGTCGG
TGGCACCATGCAGATGCTGGGTGGCCGTCAGGGCGGTGGCGCACCAGCAGGTGGCGGCCAGCAGCAGGGCGGTTGGGGTC
AGCCTCAGCAGCCACAGGGCGGCAACCAGTTCAGCGGCGGCGCACAGTCTCGTCCGCAGCAGCAGTCTGCGCCGGCGCCG
TCTAACGAACCGCCAATGGATTTCGACGACGACATTCCGTTCTGA
ATGGCCAGCAGAGGCGTAAACAAGGTGATTCTCGTCGGTAATCTGGGCCAGGACCCGGAAGTACGCTACATGCCGAGTGG
TGGCGCAGTTGCCAACATTACGCTGGCTACTTCCGAATCCTGGCGTGATAAAGCGACCGGTGAGATGAAAGAGCAGACCG
AATGGCACCGCGTTGTGCTGTTTGGCAAACTGGCAGAAGTGGCCGGTGAGTATCTGCGTAAAGGTTCTCAGGTGTATATC
GAAGGCCAGCTGCGTACCCGCAAATGGACCGATCAGTCCGGAGCTGAGAAGTACACCACTGAAGTGGTGGTTAACGTCGG
TGGCACCATGCAGATGCTGGGTGGCCGTCAGGGCGGTGGCGCACCAGCAGGTGGCGGCCAGCAGCAGGGCGGTTGGGGTC
AGCCTCAGCAGCCACAGGGCGGCAACCAGTTCAGCGGCGGCGCACAGTCTCGTCCGCAGCAGCAGTCTGCGCCGGCGCCG
TCTAACGAACCGCCAATGGATTTCGACGACGACATTCCGTTCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Vibrio cholerae strain A1552 |
76.111 |
100 |
0.787 |
| ssb | Glaesserella parasuis strain SC1401 |
57.377 |
100 |
0.603 |
| ssb | Neisseria meningitidis MC58 |
47.191 |
100 |
0.483 |
| ssb | Neisseria gonorrhoeae MS11 |
47.191 |
100 |
0.483 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
35.556 |
100 |
0.368 |