Detailed information    

insolico Bioinformatically predicted

Overview

Name   comM   Type   Machinery gene
Locus tag   ACE1C5_RS07985 Genome accession   NZ_CP170124
Coordinates   1720016..1721530 (-) Length   504 a.a.
NCBI ID   WP_064619147.1    Uniprot ID   A0A7Z0UXU8
Organism   Moraxella sp. ATCC 23246     
Function   DNA binding (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1715016..1726530
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACE1C5_RS07970 (ACE1C5_07970) map 1716233..1717021 (-) 789 WP_064619139.1 type I methionyl aminopeptidase -
  ACE1C5_RS07975 (ACE1C5_07975) - 1717170..1717499 (-) 330 WP_064619142.1 TIGR01244 family sulfur transferase -
  ACE1C5_RS07980 (ACE1C5_07980) - 1717764..1719914 (+) 2151 WP_064619145.1 NADPH-dependent 2,4-dienoyl-CoA reductase -
  ACE1C5_RS07985 (ACE1C5_07985) comM 1720016..1721530 (-) 1515 WP_064619147.1 YifB family Mg chelatase-like AAA ATPase Machinery gene
  ACE1C5_RS07990 (ACE1C5_07990) rapA 1721617..1724481 (-) 2865 WP_064619150.1 RNA polymerase-associated protein RapA -
  ACE1C5_RS07995 (ACE1C5_07995) - 1724691..1725647 (+) 957 WP_064619153.1 D-2-hydroxyacid dehydrogenase -

Sequence

Protein


Download         Length: 504 a.a.        Molecular weight: 54399.40 Da        Isoelectric Point: 7.8082

>NTDB_id=1055222 ACE1C5_RS07985 WP_064619147.1 1720016..1721530(-) (comM) [Moraxella sp. ATCC 23246]
MSFAKVFTRSVVGLQAPQVFVEVHLSQGLPALTIVGLPEASVRESKDRVRSALINSGYEFPNRRLTINLAPADLPKDGAR
LDLPIAMGILAASGQIDDKVLADFEFVGELALNGELRPVSGALAIARAIKSARHDDKSRTLIMPSMNACEAVKVGDMTVL
AADHLAAVCRHLDVVSGISQNQADILPTATLPHQPQVTQYAYDLADVKGQHHARRALEIAAAGGHSILFTGSPGSGKTLM
ASRLPSILPPLTEAEALEVASIYSIAGAEYAFGERPFRAIHHTISATALVGGGSKPKPGEISLAHKGAIFLDEIPEFDRK
TLETLRQPIESKQITISRANAQVSFPADFQLIAAMNPCPCGYHGDTTNRCRCRPEQIKKYQDKLSGPLLDRIDLHITVPA
LPIEDLQSAPKGESSDEVRQRVVAARDMAVARQGKANYELTASELDQVAILGQKEQQMLKMAQSKLNLSARSYHRILRVA
RTIADLAASEHIKTAHVAEALSYR

Nucleotide


Download         Length: 1515 bp        

>NTDB_id=1055222 ACE1C5_RS07985 WP_064619147.1 1720016..1721530(-) (comM) [Moraxella sp. ATCC 23246]
ATGTCATTTGCCAAAGTTTTTACGCGTTCGGTTGTTGGATTGCAGGCGCCGCAAGTATTTGTTGAAGTTCATCTCTCCCA
AGGGTTGCCAGCCTTAACCATCGTCGGGTTGCCTGAAGCTTCGGTACGCGAGAGTAAAGATCGGGTACGCTCAGCACTGA
TTAACTCAGGATATGAATTTCCCAATCGCCGCTTGACGATCAATCTTGCGCCTGCCGATCTGCCAAAGGATGGGGCGAGG
CTGGATCTGCCGATTGCGATGGGTATTTTGGCGGCCAGCGGTCAGATTGATGATAAGGTCTTGGCAGATTTTGAATTTGT
GGGAGAGCTTGCGCTCAATGGCGAGCTTAGACCTGTTTCTGGCGCACTTGCTATTGCTCGCGCCATTAAGTCTGCCCGTC
ATGATGACAAATCTCGCACGCTGATTATGCCAAGTATGAACGCCTGTGAAGCGGTGAAGGTGGGCGATATGACGGTGCTT
GCTGCCGATCATCTGGCGGCGGTTTGTCGTCATTTGGATGTGGTGAGCGGCATCAGCCAAAATCAAGCGGATATCTTGCC
GACAGCGACTTTGCCACATCAGCCCCAAGTGACGCAGTACGCGTATGATTTGGCAGATGTCAAAGGGCAGCATCACGCAC
GCCGAGCGCTTGAGATTGCAGCGGCTGGCGGTCACTCGATACTATTTACAGGGTCACCTGGATCAGGCAAGACTCTGATG
GCATCGCGCCTGCCCAGTATTTTGCCGCCCCTGACCGAGGCAGAAGCCTTAGAGGTGGCGAGCATCTACTCGATTGCAGG
CGCGGAGTATGCCTTTGGCGAGCGACCTTTTCGTGCCATCCACCACACCATCTCTGCGACCGCTTTGGTTGGTGGCGGCT
CAAAACCCAAACCTGGTGAGATTAGCCTAGCCCACAAAGGCGCGATTTTCCTTGATGAGATTCCAGAATTTGATCGTAAA
ACACTCGAAACCTTGCGCCAGCCCATCGAGTCCAAGCAGATTACCATCTCTCGCGCTAATGCCCAGGTATCATTTCCTGC
TGATTTTCAGCTGATCGCTGCCATGAACCCTTGCCCTTGTGGGTATCACGGCGACACCACGAACCGCTGCCGCTGCCGAC
CTGAGCAAATTAAAAAATATCAAGATAAACTGTCAGGACCTTTGCTAGATCGCATCGATTTACACATTACCGTACCTGCT
TTGCCCATCGAGGATTTACAAAGCGCGCCAAAGGGTGAGTCATCAGATGAGGTCCGTCAAAGAGTTGTGGCAGCACGTGA
TATGGCAGTGGCTCGTCAAGGCAAAGCCAATTATGAGCTGACAGCCAGTGAACTTGATCAAGTCGCTATATTGGGTCAAA
AAGAACAGCAAATGCTCAAGATGGCTCAATCCAAGCTCAACTTGTCTGCTCGCAGTTACCACCGCATCTTGCGCGTCGCG
CGTACCATTGCAGATTTAGCCGCCAGCGAGCACATCAAAACAGCGCATGTGGCAGAAGCCTTAAGCTATCGATAA

Domains

Predicted by InterproScan.

Subunit ChlI of Mg-chelatase (ChlI)

(21-147)

Magnesium chelatase, subunit ChlI (Mg_chelatase)

(203-404)

Magnesium chelatase, subunit ChlI C-terminal (Mg_chelatase_C)

(412-504)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7Z0UXU8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comM Legionella pneumophila str. Paris

51.663

100

0.524
  comM Legionella pneumophila strain ERS1305867

51.663

100

0.524
  comM Haemophilus influenzae Rd KW20

51.267

100

0.522
  comM Glaesserella parasuis strain SC1401

50.485

100

0.516
  comM Vibrio cholerae strain A1552

49.803

100

0.502
  comM Vibrio campbellii strain DS40M4

49.409

100

0.498
  RA0C_RS07335 Riemerella anatipestifer ATCC 11845 = DSM 15868

44.814

100

0.454

Multiple sequence alignment