Detailed information    

insolico Bioinformatically predicted

Overview

Name   comM   Type   Machinery gene
Locus tag   ACEY3W_RS23520 Genome accession   NZ_CP169333
Coordinates   4803349..4804869 (-) Length   506 a.a.
NCBI ID   WP_023232435.1    Uniprot ID   A0A3V6WIV3
Organism   Salmonella enterica strain SA99     
Function   require for natural transformation (predicted from homology)   
Unclear

Genomic Context

Location: 4798349..4809869
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACEY3W_RS23510 (ACEY3W_23510) hdfR 4802031..4802879 (-) 849 WP_086010515.1 HTH-type transcriptional regulator HdfR -
  ACEY3W_RS23515 (ACEY3W_23515) maoP 4802986..4803324 (+) 339 WP_000840996.1 macrodomain Ori organization protein MaoP -
  ACEY3W_RS23520 (ACEY3W_23520) comM 4803349..4804869 (-) 1521 WP_023232435.1 YifB family Mg chelatase-like AAA ATPase Machinery gene
  ACEY3W_RS23525 (ACEY3W_23525) ilvL 4805221..4805319 (+) 99 WP_001311244.1 ilv operon leader peptide -
  ACEY3W_RS23530 (ACEY3W_23530) ilvX 4805406..4805456 (+) 51 WP_192930503.1 peptide IlvX -
  ACEY3W_RS23535 (ACEY3W_23535) ilvG 4805459..4807105 (+) 1647 WP_023232433.1 acetolactate synthase 2 catalytic subunit -
  ACEY3W_RS23540 (ACEY3W_23540) ilvM 4807102..4807365 (+) 264 WP_000983260.1 acetolactate synthase 2 small subunit -
  ACEY3W_RS23545 (ACEY3W_23545) ilvE 4807383..4808312 (+) 930 WP_000208532.1 branched-chain-amino-acid transaminase -

Sequence

Protein


Download         Length: 506 a.a.        Molecular weight: 54913.13 Da        Isoelectric Point: 8.7595

>NTDB_id=1050657 ACEY3W_RS23520 WP_023232435.1 4803349..4804869(-) (comM) [Salmonella enterica strain SA99]
MSLAIVHTRAALGVNAPPITIEVHISNGLPGLTMVGLPETTVKEARDRVRSAIINSGYEFPAKKITINLAPADLPKEGGR
YDLPIAVALLAASEQLTASNLEAYELVGELALTGALRGVPGAISSATEAIKAGRNIIVATENAAEVGLISKEGCFIADHL
QTVCAFLEGKHALERPLAQDMASPTATADLRDVIGQGQGKRGLEITAAGGHNLLLIGPPGTGKTMLASRLSGILPPLSNE
EALESAAILSLVNADTVQKRWQQRPFRSPHHSASLTAMVGGGAIPAPGEISLAHNGILFLDELPEFERRTLDALREPIES
GQIHLSRTRAKITYPARFQLIAAMNPSPTGHYQGNHNRCTPEQTLRYLNRLSGPFLDRFDLSLEIPLPPPGILSQHASKG
ESSATVKKRVIAAHERQYRRQKKLNARLEGREIQKYCVLHHDDARWLEDTLVHLGLSIRAWQRLLKVARTIADIELADQI
SRQHLQEAVSYRAIDRLLIHLQKLLA

Nucleotide


Download         Length: 1521 bp        

>NTDB_id=1050657 ACEY3W_RS23520 WP_023232435.1 4803349..4804869(-) (comM) [Salmonella enterica strain SA99]
ATGTCACTGGCGATTGTTCATACCCGCGCCGCACTTGGCGTCAATGCGCCGCCTATCACTATAGAGGTGCATATCAGTAA
TGGTTTACCGGGACTAACCATGGTTGGCCTACCGGAAACCACGGTAAAAGAGGCGCGTGATCGGGTACGTAGTGCGATTA
TTAATAGCGGATATGAATTTCCGGCTAAAAAAATAACCATTAACCTTGCTCCAGCCGATCTACCGAAAGAGGGTGGAAGG
TATGACCTGCCTATTGCTGTTGCGCTTCTGGCCGCGTCTGAGCAGCTTACAGCGTCGAATCTTGAGGCATATGAGCTGGT
GGGTGAGTTAGCGCTTACAGGCGCATTACGCGGCGTTCCTGGCGCAATATCAAGTGCAACGGAAGCTATCAAGGCCGGCA
GAAATATTATCGTCGCAACAGAGAACGCGGCGGAGGTTGGGCTTATCAGCAAAGAAGGATGTTTTATCGCCGATCATCTA
CAAACCGTCTGCGCCTTTCTGGAAGGGAAACACGCCCTGGAAAGACCTTTAGCTCAGGATATGGCATCGCCTACCGCAAC
TGCCGATCTTCGCGATGTGATCGGTCAGGGGCAGGGTAAACGCGGCCTGGAGATTACAGCGGCAGGGGGGCATAATCTGC
TATTGATCGGCCCGCCGGGTACGGGTAAAACCATGCTGGCCAGTCGACTGAGCGGGATTCTTCCACCATTAAGCAATGAA
GAGGCGTTGGAAAGCGCCGCGATCCTCAGTCTGGTTAATGCCGATACGGTACAAAAACGATGGCAGCAACGCCCCTTTCG
CTCACCTCATCATAGCGCCTCACTTACTGCTATGGTCGGCGGCGGCGCAATACCCGCCCCGGGAGAGATATCGCTGGCGC
ACAACGGAATTTTGTTCCTTGATGAATTGCCTGAATTTGAGCGACGCACACTGGATGCGCTACGTGAACCTATAGAATCC
GGTCAAATTCATTTATCCCGTACCAGAGCGAAAATAACGTACCCTGCCAGGTTCCAGTTAATCGCCGCAATGAATCCCAG
CCCGACCGGACATTATCAGGGAAACCATAATCGCTGCACGCCAGAACAGACACTACGTTACCTTAATCGGTTGTCAGGCC
CGTTTCTTGATCGTTTTGACCTTTCGCTTGAGATACCGCTTCCACCGCCCGGGATTCTTAGCCAACACGCCTCAAAGGGT
GAGAGCAGCGCTACGGTAAAAAAGCGGGTCATCGCCGCCCATGAACGGCAGTACCGACGCCAGAAGAAGTTAAACGCGCG
TCTGGAGGGTCGCGAAATCCAAAAATATTGTGTTTTGCATCACGATGACGCTCGCTGGCTTGAAGACACGCTGGTGCATC
TTGGATTATCCATTCGCGCCTGGCAGCGTTTACTAAAAGTGGCCAGAACCATTGCCGACATAGAACTGGCTGACCAGATC
TCACGTCAGCATTTGCAGGAAGCGGTAAGCTATCGGGCGATAGACAGGTTGTTAATTCATTTGCAAAAGCTGCTGGCGTA
A

Domains

Predicted by InterproScan.

Magnesium chelatase, subunit ChlI C-terminal (Mg_chelatase_C)

(400-492)

Magnesium chelatase, subunit ChlI (Mg_chelatase)

(189-386)

Subunit ChlI of Mg-chelatase (ChlI)

(21-142)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A3V6WIV3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comM Haemophilus influenzae Rd KW20

58.513

100

0.591
  comM Glaesserella parasuis strain SC1401

58.35

100

0.587
  comM Vibrio cholerae strain A1552

58.812

99.802

0.587
  comM Vibrio campbellii strain DS40M4

57.54

99.605

0.573
  comM Legionella pneumophila str. Paris

47.887

98.221

0.47
  comM Legionella pneumophila strain ERS1305867

47.887

98.221

0.47
  RA0C_RS07335 Riemerella anatipestifer ATCC 11845 = DSM 15868

42.801

100

0.429

Multiple sequence alignment